RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SMYD3Q9H7B4 428 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 SLC28A3Q9HAS3 691 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 AAASQ9NRG9 546 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 IFNKQ9P0W0 207 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 GCNT4Q9P109 453 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 PCDHB8Q9UN66 801 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 PCDHB12Q9Y5F1 795 aa10.62□□□□□ -0.71
CLN8-202ENST00000517514 TIMM13Q9Y5L4 95 aaPredicted RBP10.62□□□□□ -0.71
CLN8-202ENST00000517514 SF3B1O75533 1304 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLN8-202ENST00000517514 CYB561D2O14569 222 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 GABRDO14764 452 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 ADAM12O43184 909 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 SOD2P04179 222 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 ACO1P21399 889 aaKnown RBP10.61□□□□□ -0.71
CLN8-202ENST00000517514 IRS1P35568 1242 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 PPM1AP35813 382 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 PNPLA4P41247 253 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 RAP1GAPP47736 663 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 LRMPQ12912 555 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 GPM6BQ13491 265 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 SYCP1Q15431 976 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 EXOC3L4Q17RC7 722 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 CCDC142Q17RM4 750 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 WDR72Q3MJ13 1102 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 SV2CQ496J9 727 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 HABP4Q5JVS0 413 aaKnown RBP10.61□□□□□ -0.71
CLN8-202ENST00000517514 FAM171A1Q5VUB5 890 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 WSCD1Q658N2 575 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 GBP6Q6ZN66 633 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 PDCL2Q8N4E4 241 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 FBXO22Q8NEZ5 403 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 LNX1Q8TBB1 728 aaPredicted RBP10.61□□□□□ -0.71
CLN8-202ENST00000517514 GDPD5Q8WTR4 605 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 POF1BQ8WVV4 589 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 AUTS2Q8WXX7 1259 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 ARNTL2Q8WYA1 636 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 TAF4BQ92750 862 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 TMEM169Q96HH4 297 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 NAA15Q9BXJ9 866 aaKnown RBP10.61□□□□□ -0.71
CLN8-202ENST00000517514 ZNF576Q9H609 170 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 NXF1Q9UBU9 619 aaKnown RBP10.61□□□□□ -0.71
CLN8-202ENST00000517514 HMGXB4Q9UGU5 601 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 LZTS1Q9Y250 596 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 RWDD3Q9Y3V2 267 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 SNX9Q9Y5X1 595 aa10.61□□□□□ -0.71
CLN8-202ENST00000517514 MTCL1Q9Y4B5 1905 aaKnown RBP10.6□□□□□ -0.71
CLN8-202ENST00000517514 RNF225M0QZC1 329 aaPredicted RBP10.6□□□□□ -0.71
CLN8-202ENST00000517514 SERPINC1P01008 464 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 WEE2P0C1S8 567 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 TYMPP19971 482 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 PAX3P23760 479 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 UBASH3AP57075 661 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 TPM4P67936 248 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 DSG1Q02413 1049 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 UBXN1Q04323 297 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 MYO1EQ12965 1108 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 GRIN2CQ14957 1233 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 UVSSAQ2YD98 709 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 ZNF667Q5HYK9 610 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 VARS2Q5ST30 1063 aaKnown RBP10.6□□□□□ -0.71
CLN8-202ENST00000517514 KLHDC7AQ5VTJ3 777 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 IQCEQ6IPM2 695 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 PRSS55Q6UWB4 352 aaPredicted RBP10.6□□□□□ -0.71
CLN8-202ENST00000517514 DSTYKQ6XUX3 929 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 SCARA5Q6ZMJ2 495 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.6□□□□□ -0.71
CLN8-202ENST00000517514 RRAGAQ7L523 313 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 VPS52Q8N1B4 723 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 TOP6BLQ8N6T0 577 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 WHAMMQ8TF30 809 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 TWNKQ96RR1 684 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 TMEM209Q96SK2 561 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 C11orf84Q9BUA3 381 aaPredicted RBP10.6□□□□□ -0.71
CLN8-202ENST00000517514 LSM14BQ9BX40 385 aaKnown RBP10.6□□□□□ -0.71
CLN8-202ENST00000517514 GPR88Q9GZN0 384 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 NIF3L1Q9GZT8 377 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 PLCB1Q9NQ66 1216 aa10.6□□□□□ -0.71
CLN8-202ENST00000517514 A0A1W2PQC6 194 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 CARNS1A5YM72 827 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 HIDE1A8MVS5 230 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 PES1O00541 588 aaKnown RBP10.59□□□□□ -0.71
CLN8-202ENST00000517514 SYN3O14994 580 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 TACC1O75410 805 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 OAZ2O95190 189 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 VNN2O95498 520 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 CTSAP10619 480 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 WARSP23381 471 aaKnown RBP10.59□□□□□ -0.71
CLN8-202ENST00000517514 LMO2P25791 158 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 UBE3AQ05086 875 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 INCA1Q0VD86 236 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 CUL2Q13617 745 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 ADGRE1Q14246 886 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 PTPN14Q15678 1187 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 USP41Q3LFD5 358 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 DPH6Q7L8W6 267 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 ANKRD20A12PQ8NF67 263 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 OR10T2Q8NGX3 314 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 PIK3R5Q8WYR1 880 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 FAXDC2Q96IV6 333 aa10.59□□□□□ -0.71
CLN8-202ENST00000517514 NT5C1BQ96P26 610 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms