RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 ABHD16BQ9H3Z7 469 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 CHMP4BQ9H444 224 aaKnown RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 RABEP2Q9H5N1 569 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 DCAF16Q9NXF7 216 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SCOCQ9UIL1 159 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 MKL2Q9ULH7 1088 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SMG5Q9UPR3 1016 aaKnown RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 MTO1Q9Y2Z2 717 aaKnown RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 STARD13Q9Y3M8 1113 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ACTL7BQ9Y614 415 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 MEGF11A6BM72 1044 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 CLCA1A8K7I4 914 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 FAM171A2A8MVW0 826 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 E7EVH7 732 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 KRIT1O00522 736 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 UBE2CO00762 179 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 SGTAO43765 313 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 PPP1R11O60927 126 aaPredicted RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 LILRB5O75023 590 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 SRGAP2O75044 1071 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 PGM3O95394 542 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 GUCA1CO95843 209 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 AFPP02771 609 aaKnown RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 FUCA1P04066 466 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 NPPBP16860 134 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 RAB6AP20340 208 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 GJA4P35212 333 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 ARFIP2P53365 341 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 SESN2P58004 480 aaPredicted RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 HMGN5P82970 282 aaKnown RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 CDC42EP1Q00587 391 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 TFCP2Q12800 502 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 AIMP1Q12904 312 aaKnown RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 BFSP1Q12934 665 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 SEMA3AQ14563 771 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 ANKRD1Q15327 319 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 BAK1Q16611 211 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 MAN2A1Q16706 1144 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 DUSP28Q4G0W2 176 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 FAM180AQ6UWF9 173 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 C8orf86Q6ZUL3 223 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 GAREM2Q75VX8 874 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 H1FNTQ75WM6 255 aaPredicted RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 ARHGEF25Q86VW2 580 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 VGLL2Q8N8G2 317 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 SPC24Q8NBT2 197 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 SMG8Q8ND04 991 aaKnown RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 Q8NFD4 153 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 GDAP1Q8TB36 358 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 BCL7CQ8WUZ0 217 aaPredicted RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 C3orf49Q96BT1 292 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 FOXRED1Q96CU9 486 aaPredicted RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 APOPT1Q96IL0 206 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 MDFIQ99750 246 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 FSD1Q9BTV5 496 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 KRTAP3-3Q9BYR6 98 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 KRTAP3-2Q9BYR7 98 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 TRIM5Q9C035 493 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 BRD8Q9H0E9 1235 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 GSX1Q9H4S2 264 aaPredicted RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 WDCPQ9H6R7 721 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 SMURF2Q9HAU4 748 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 ERVK-5Q9HDB9 667 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 PRDM8Q9NQV8 689 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 GULP1Q9UBP9 304 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 LPAR3Q9UBY5 353 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 SRRDQ9UH36 339 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 CHORDC1Q9UHD1 332 aaPredicted RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 MOSPD1Q9UJG1 213 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 ZMYND8Q9ULU4 1186 aaPredicted RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 NAALADL1Q9UQQ1 740 aa4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 MTF2Q9Y483 593 aaPredicted RBP4.34□□□□□ -1.71
RNU4-60P-201ENST00000517239 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 CCDC69A6NI79 296 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 AGAP14A8MT82 685 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 PI4K2BG5E9Z4 385 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 PYCARD-AS1I3L0S3 204 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 SH2B2O14492 632 aaPredicted RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 AKR1B10O60218 316 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 ENDOD1O94919 500 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 ALBP02768 609 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 QDPRP09417 244 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 UBL4AP11441 157 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 CPA1P15085 419 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 TGM1P22735 817 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 GGT5P36269 586 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 PGM1P36871 562 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 EIF2DP41214 584 aaKnown RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 TNNT2P45379 298 aaPredicted RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 MCM2P49736 904 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 PPP5CP53041 499 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 SOX8P57073 446 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 PCBP3P57721 371 aaKnown RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 RPS3AP61247 264 aaKnown RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 RPP30P78346 268 aaKnown RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 RBP5P82980 135 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 IL1RL1Q01638 556 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 TARDBPQ13148 414 aaKnown RBP eCLIP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 CTBP1Q13363 440 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 DCTN2Q13561 401 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms