RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 C8orf58Q8NAV2 365 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 RNF169Q8NCN4 708 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 HMGB4Q8WW32 186 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 SLC7A3Q8WY07 619 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 ROBO4Q8WZ75 1007 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 EZH1Q92800 747 aaPredicted RBP3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 HPS3Q969F9 1004 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 TCEAL4Q96EI5 215 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 CHFRQ96EP1 664 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 ZNF419Q96HQ0 510 aaPredicted RBP3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 MTMR9Q96QG7 549 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 P2RY13Q9BPV8 354 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 NOL10Q9BSC4 688 aaKnown RBP3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 HERC2P3Q9BVR0 1158 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 MRPL9Q9BYD2 267 aaKnown RBP3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 MIR1-1HGQ9H1L0 117 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 FN3KRPQ9HA64 309 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 GOPCQ9HD26 462 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 PPP4R2Q9NY27 417 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 TJP2Q9UDY2 1190 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 TRPS1Q9UHF7 1281 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 FBXO3Q9UK99 471 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 FBXW11Q9UKB1 542 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 LAS1LQ9Y4W2 734 aaKnown RBP3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 PCDHGA8Q9Y5G5 932 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 TRPV2Q9Y5S1 764 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 CHD3Q12873 2000 aaKnown RBP3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 KIAA1549LQ6ZVL6 1849 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 DNAH1Q9P2D7 4330 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 ABCA4P78363 2273 aa3.69□□□□□ -1.82
SCARNA13-201ENST00000516672 HIVEP2P31629 2446 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 H0Y8X5 98 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 DLGAP3O95886 979 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 F11P03951 625 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 LIPCP11150 499 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 EEF2P13639 858 aaKnown RBP3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 GLUD2P49448 558 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 GALK1P51570 392 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 USP11P51784 963 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 KRT85P78386 507 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 IRX6P78412 446 aaPredicted RBP3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 E2F1Q01094 437 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 DSC3Q14574 896 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 KIF19Q2TAC6 998 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 ITPRIPL2Q3MIP1 535 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 HSDL1Q3SXM5 330 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 ALDH1L2Q3SY69 923 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 IER5Q5VY09 327 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 CEP135Q66GS9 1140 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 NAIF1Q69YI7 327 aaPredicted RBP3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 TTC6Q86TZ1 520 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 CCDC33Q8N5R6 958 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 EID2Q8N6I1 236 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 KRI1Q8N9T8 703 aaKnown RBP3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 SIMC1Q8NDZ2 872 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 NEDD1Q8NHV4 660 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 ZSCAN18Q8TBC5 510 aaPredicted RBP3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 MBOAT7Q96N66 472 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 MPHOSPH6Q99547 160 aaKnown RBP3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 NRDE2Q9H7Z3 1164 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 TRPV4Q9HBA0 871 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 SEPT10Q9P0V9 454 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 SEL1LQ9UBV2 794 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 DNAJB4Q9UDY4 337 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 PARP2Q9UGN5 583 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 PNMA2Q9UL42 364 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 STARD13Q9Y3M8 1113 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 ZBED9Q6R2W3 1325 aa3.68□□□□□ -1.82
SCARNA13-201ENST00000516672 IGHV1OR15-9A0A0B4J2B8 117 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 ANKUB1A6NFN9 424 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 ESPNB1AK53 854 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 M0QZ92 97 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 BCAT2O15382 392 aaPredicted RBP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 DHX15O43143 795 aaKnown RBP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 PAPSS1O43252 624 aaPredicted RBP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 SORBS2O94875 1100 aaKnown RBP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 LGALS2P05162 132 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 CYP2E1P05181 493 aaPredicted RBP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 POU2F2P09086 479 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 CKMT2P17540 419 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 PTPN2P17706 415 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 DDX6P26196 483 aaKnown RBP eCLIP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 SLC5A2P31639 672 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 HNRNPUQ00839 825 aaKnown RBP eCLIP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 FOLH1Q04609 750 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 EXOSC9Q06265 439 aaKnown RBP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 ELOAQ14241 798 aaKnown RBP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 PTPAQ15257 358 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 ARHGAP29Q52LW3 1261 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 PRSS36Q5K4E3 855 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 CCDC102BQ68D86 513 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 BNC2Q6ZN30 1099 aaPredicted RBP3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 TMPRSS9Q7Z410 1059 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 GPIHBP1Q8IV16 184 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 CEP97Q8IW35 865 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 TSPYL6Q8N831 410 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 LINS1Q8NG48 757 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 SLC7A14Q8TBB6 771 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 ARHGAP45Q92619 1136 aa3.67□□□□□ -1.82
SCARNA13-201ENST00000516672 TSR2Q969E8 191 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms