RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 JKAMPQ9P055 326 aa3.18□□□□□ -1.9
SNORA40.14-201ENST00000516543 IPPQ9Y573 584 aa3.18□□□□□ -1.9
SNORA40.14-201ENST00000516543 HTRA2O43464 458 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 ORC4O43929 436 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 PRR35P0CG20 571 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 NR2F6P10588 404 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 LPOP22079 712 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 IARSP41252 1262 aaKnown RBP3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 WASP42768 502 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 NPTX2P47972 431 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 CDC42EP1Q00587 391 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 TLE1Q04724 770 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 FAPQ12884 760 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 EIF2B5Q13144 721 aaKnown RBP3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 KLF1Q13351 362 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 EZH2Q15910 746 aaKnown RBP3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 ATP2B3Q16720 1220 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 GIMAP6Q6P9H5 292 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 FAM9AQ8IZU1 332 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 CBARPQ8N350 705 aaPredicted RBP3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 ZBTB9Q96C00 473 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 TRIB1Q96RU8 372 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 SH2D3AQ9BRG2 576 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 PACSIN1Q9BY11 444 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 KLC4Q9NSK0 619 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 PADI4Q9UM07 663 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 PCDHB1Q9Y5F3 818 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 NR2E3Q9Y5X4 410 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 WASHC2AQ641Q2 1341 aa3.17□□□□□ -1.9
SNORA40.14-201ENST00000516543 PHLDB1Q86UU1 1377 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 TLDC2A0PJX2 215 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 CCDC154A6NI56 674 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 TRIM75PA6NK02 468 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 LINC01548A6NM66 108 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 K7ESF4 209 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 PCDHGA12O60330 932 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 URI1O94763 535 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 HNRNPCP07910 306 aaKnown RBP eCLIP3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 PDHA1P08559 390 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 EBLN1P0CF75 366 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 JUPP14923 745 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 CHRM3P20309 590 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 DRD4P21917 467 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 PCSK6P29122 969 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 MPGP29372 298 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 CNGA1P29973 690 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 GRM1Q13255 1194 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 HLXQ14774 488 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 LLGL1Q15334 1064 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 ETFDHQ16134 617 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 INAVAQ3KP66 663 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 C11orf87Q6NUJ2 197 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 NOP9Q86U38 636 aaKnown RBP3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 CNTD1Q8N815 330 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 SEMA6DQ8NFY4 1073 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 POC1BQ8TC44 478 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 CLPTM1LQ96KA5 538 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 PBKQ96KB5 322 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 VRK1Q99986 396 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 AMBRA1Q9C0C7 1298 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 FLRT1Q9NZU1 646 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 AGAP1Q9UPQ3 857 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 NEU2Q9Y3R4 380 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 PCDHGA9Q9Y5G4 932 aaKnown RBP3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 PCDHGA8Q9Y5G5 932 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 PCDHGA7Q9Y5G6 932 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 PCDHGA6Q9Y5G7 932 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 PCDHGA3Q9Y5H0 932 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 ZNF804BA4D1E1 1349 aa3.16□□□□□ -1.9
SNORA40.14-201ENST00000516543 A0A0B4J269 797 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 PRSS29PA6NIE9 313 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 F5H697 171 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 F2RL2O00254 374 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 POLRMTO00411 1230 aaKnown RBP3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 LATS1O95835 1130 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 TTLL1O95922 423 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 MT-CO1P00395 513 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 PHKA1P46020 1223 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 CCT8P50990 548 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 SOX10P56693 466 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 NXPH1P58417 271 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 PSMC1P62191 440 aaKnown RBP3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 POU6F2P78424 691 aaPredicted RBP3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 ITIH3Q06033 890 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 TUBB3Q13509 450 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 ACAP2Q15057 778 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 FAM153CQ494X1 144 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 TAF7LQ5H9L4 462 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 RNF219Q5W0B1 726 aaPredicted RBP3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 TAF2Q6P1X5 1199 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 PGM2L1Q6PCE3 622 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 MIGA2Q7L4E1 593 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 AMOTL1Q8IY63 956 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 C1orf162Q8NEQ5 155 aaPredicted RBP3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 HDAC10Q969S8 669 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 REPS1Q96D71 796 aa3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 ZNF48Q96MX3 618 aaPredicted RBP3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 QTRT1Q9BXR0 403 aaKnown RBP3.15□□□□□ -1.91
SNORA40.14-201ENST00000516543 SLKQ9H2G2 1235 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms