RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 TMIEQ8NEW7 156 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 MYCBPAPQ8TBZ2 947 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 HASPINQ8TF76 798 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 SCAMP4Q969E2 229 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 TRIB1Q96RU8 372 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 SMOQ99835 787 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 SPC25Q9HBM1 224 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 KLC4Q9NSK0 619 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 GNL3LQ9NVN8 582 aaKnown RBP3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 SIDT1Q9NXL6 827 aaKnown RBP3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 ATP8A1Q9Y2Q0 1164 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 WNT6Q9Y6F9 365 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 SPATA31A3Q5VYP0 1347 aa3.91□□□□□ -1.78
RNU4-49P-201ENST00000516080 SHTN1A0MZ66 631 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 DNAJC9-AS1A6NH13 148 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 MT-CO1P00395 513 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 CHRM2P08172 466 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 MYBL2P10244 700 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 EDNRBP24530 442 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 CYP2C19P33261 490 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 NPTX2P47972 431 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 PROK1P58294 105 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 KIF23Q02241 960 aaPredicted RBP3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 C3orf36Q3SXR2 165 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 NSUN7Q8NE18 718 aaKnown RBP3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 NSUN6Q8TEA1 469 aaKnown RBP3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 SMG7Q92540 1137 aaKnown RBP3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 COA7Q96BR5 231 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 NAF1Q96HR8 494 aaKnown RBP3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 HAPLN3Q96S86 360 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 WDR26Q9H7D7 661 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 RLIMQ9NVW2 624 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 SLC45A2Q9UMX9 530 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 PCDHB1Q9Y5F3 818 aa3.9□□□□□ -1.79
RNU4-49P-201ENST00000516080 A0A0B4J269 797 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 WDR27A2RRH5 827 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 LINC00473A8K010 186 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 POLRMTO00411 1230 aaKnown RBP3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 TRIAP1O43715 76 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 PCDHGA12O60330 932 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 SOAT2O75908 522 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 URI1O94763 535 aaPredicted RBP3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 CHEK2O96017 543 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 GNAI3P08754 354 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 ELFN1P0C7U0 828 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 PPP3CBP16298 524 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 SMARCA1P28370 1054 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 GNAI1P63096 354 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 MC2RQ01718 297 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 TUBB3Q13509 450 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 FCRLBQ6BAA4 426 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 GLCCI1Q86VQ1 547 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 FAM9AQ8IZU1 332 aaPredicted RBP3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 POC1BQ8TC44 478 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 KAT5Q92993 513 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 LRIG1Q96JA1 1093 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 TEKT5Q96M29 485 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 DMRTA2Q96SC8 542 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 OSBPL9Q96SU4 736 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 ALG8Q9BVK2 526 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 SLC29A3Q9BZD2 475 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 SIK2Q9H0K1 926 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 BRD9Q9H8M2 597 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 CFAP97Q9P2B7 532 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 TRHDEQ9UKU6 1024 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 PCDHGA9Q9Y5G4 932 aaKnown RBP3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 PCDHGA8Q9Y5G5 932 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 PCDHGA7Q9Y5G6 932 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 PCDHGA6Q9Y5G7 932 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 PCDHGA3Q9Y5H0 932 aa3.89□□□□□ -1.79
RNU4-49P-201ENST00000516080 COL3A1P02461 1466 aaPredicted RBP3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 F5H697 171 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 F2RL2O00254 374 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 ARIH2O95376 493 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 TTLL1O95922 423 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 PRKCGP05129 697 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 GJB1P08034 283 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 FTH1P19P0C7X4 201 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 MALP21145 153 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 ITPKBP27987 946 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 GUCY2FP51841 1108 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 HNRNPMP52272 730 aaKnown RBP eCLIP3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 ADKP55263 362 aaKnown RBP3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 ITKQ08881 620 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 ABCB5Q2M3G0 1257 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 UAP1L1Q3KQV9 507 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 KHDC1Q4VXA5 237 aaKnown RBP3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 CCDC93Q567U6 631 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 PLAC9Q5JTB6 97 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 EPHA10Q5JZY3 1008 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 RNF187Q5TA31 235 aaPredicted RBP3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 EFCAB2Q5VUJ9 269 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 SLC4A10Q6U841 1118 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 PBKQ96KB5 322 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 POLHQ9Y253 713 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 NR2E3Q9Y5X4 410 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 ADGRA2Q96PE1 1338 aa3.88□□□□□ -1.79
RNU4-49P-201ENST00000516080 WIPF3A6NGB9 483 aa3.87□□□□□ -1.79
RNU4-49P-201ENST00000516080 MANSC4A6NHS7 340 aaPredicted RBP3.87□□□□□ -1.79
RNU4-49P-201ENST00000516080 CGB1A6NKQ9 187 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms