RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 CYBAP13498 195 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 CTNNA2P26232 953 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 POLR2BP30876 1174 aaKnown RBP16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 CTNNA1P35221 906 aaKnown RBP16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 GUCY2FP51841 1108 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 TRIB2Q92519 343 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 PLEKHA5Q9HAU0 1116 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 DPP3Q9NY33 737 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 AGAP1Q9UPQ3 857 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 PCDHA3Q9Y5H8 950 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 RAD51CO43502 376 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 C6orf222P0C671 652 aaPredicted RBP16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 MMP8P22894 467 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 TNFRSF8P28908 595 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 CDH8P55286 799 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 LACTBP83111 547 aaPredicted RBP16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 CASP8Q14790 479 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 SNX17Q15036 470 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 MFSD14CQ5VZR4 134 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 C7orf31Q8N865 590 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 SMC1BQ8NDV3 1235 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 TMEM40Q8WWA1 233 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 KIF12Q96FN5 646 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 HPDLQ96IR7 371 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 NAP1L3Q99457 506 aaPredicted RBP16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 SMYD3Q9H7B4 428 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 SNTG2Q9NY99 539 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 PCDHGC3Q9UN70 934 aa16.44■□□□□ 0.22
THUMPD3-210ENST00000515662 CCDC66A2RUB6 948 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 KPNA6O60684 536 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 HEXIM1O94992 359 aaKnown RBP16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 GNAT1P11488 350 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 GJA9P57773 515 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 RBP5P82980 135 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 CLUL1Q15846 466 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 PLEKHA7Q6IQ23 1121 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 CYP4F22Q6NT55 531 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 PAXIP1Q6ZW49 1069 aaPredicted RBP16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 AENQ8WTP8 325 aaKnown RBP16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 CXCL16Q9H2A7 254 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 GDF3Q9NR23 364 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 DERAQ9Y315 318 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 ALDH1A1P00352 501 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 AXLP30530 894 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 FLT3LGP49771 235 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 RAD23BP54727 409 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 MAMLD1Q13495 774 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 AADACL2Q6P093 401 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 IFT20Q8IY31 132 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 NME8Q8N427 588 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 TMEM35BQ8NCS4 154 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 SNX27Q96L92 541 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 ZNF518BQ9C0D4 1074 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 DDX47Q9H0S4 455 aaKnown RBP16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 CYP3A43Q9HB55 503 aa16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 MRPL47Q9HD33 250 aaKnown RBP16.43■□□□□ 0.22
THUMPD3-210ENST00000515662 MYO1FO00160 1098 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 SART1O43290 800 aaKnown RBP16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 STAU1O95793 577 aaKnown RBP16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 PAEPP09466 180 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 P4HA1P13674 534 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 CDH5P33151 784 aaPredicted RBP16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 CRYBB1P53674 252 aaPredicted RBP16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 GUCY2DQ02846 1103 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 GNASQ5JWF2 1037 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 WDTC1Q8N5D0 677 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 C1orf131Q8NDD1 294 aaKnown RBP16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 WHAMMQ8TF30 809 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 GPBP1L1Q9HC44 474 aaPredicted RBP16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 NR2E1Q9Y466 385 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 HES2Q9Y543 173 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 SCINQ9Y6U3 715 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 ZSCAN5CA6NGD5 496 aaPredicted RBP16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 KIF3CO14782 793 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 PYGMP11217 842 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 ZMAT2Q96NC0 199 aaKnown RBP16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 MTG1Q9BT17 334 aaPredicted RBP16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 UBXN6Q9BZV1 441 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 UPF3AQ9H1J1 476 aaKnown RBP16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 PLEKHA4Q9H4M7 779 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 SLITRK6Q9H5Y7 841 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 EPB41L5Q9HCM4 733 aa16.42■□□□□ 0.22
THUMPD3-210ENST00000515662 CILPO75339 1184 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 SLC1A1P43005 524 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 YARSP54577 528 aaKnown RBP16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 GYS2P54840 703 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 SLC4A11Q8NBS3 891 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 TWNKQ96RR1 684 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 ELOVL4Q9GZR5 314 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 NXF3Q9H4D5 531 aaKnown RBP16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 PARVAQ9NVD7 372 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 HMGXB4Q9UGU5 601 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 PIN4Q9Y237 131 aaKnown RBP16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 CITO14578 2027 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 RALGAPA2Q2PPJ7 1873 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 MED7O43513 233 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 PROSCO94903 275 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 CALB1P05937 261 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 CD19P15391 556 aa16.41■□□□□ 0.22
THUMPD3-210ENST00000515662 TNNT3P45378 269 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms