RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 TSHZ2Q9NRE2 1034 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLCN3-210ENST00000515420 HSFX1Q9UBD0 423 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 MUTYHQ9UIF7 546 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 ZFP37Q9Y6Q3 630 aaPredicted RBP13.79□□□□□ -0.2
CLCN3-210ENST00000515420 DOCK6Q96HP0 2047 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 TRIOO75962 3097 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 CLIC2O15247 247 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 TNNC2P02585 160 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 ITGB3P05106 788 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 PRR29P0C7W0 189 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 CPB1P15086 417 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 POLR2BP30876 1174 aaKnown RBP13.78□□□□□ -0.2
CLCN3-210ENST00000515420 CYP2J2P51589 502 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 RBP5P82980 135 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 CYP24A1Q07973 514 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 SMARCB1Q12824 385 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 GPR17Q13304 367 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 SNW1Q13573 536 aaKnown RBP13.78□□□□□ -0.2
CLCN3-210ENST00000515420 NFIL3Q16649 462 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 PTPN21Q16825 1174 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 DUOXA2Q1HG44 320 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 METTL23Q86XA0 190 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 ELOA2Q8IYF1 753 aaPredicted RBP13.78□□□□□ -0.2
CLCN3-210ENST00000515420 FEZF2Q8TBJ5 459 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 EDAQ92838 391 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 BORCS6Q96GS4 357 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 FNBP1Q96RU3 617 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 GTPBP4Q9BZE4 634 aaKnown RBP13.78□□□□□ -0.2
CLCN3-210ENST00000515420 MTMR12Q9C0I1 747 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 AVENQ9NQS1 362 aaPredicted RBP13.78□□□□□ -0.2
CLCN3-210ENST00000515420 DMAC2Q9NW81 257 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 GDAP2Q9NXN4 497 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 EPS15L1Q9UBC2 864 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 TRAF3IP3Q9Y228 551 aa13.78□□□□□ -0.2
CLCN3-210ENST00000515420 TIMM13Q9Y5L4 95 aaPredicted RBP13.78□□□□□ -0.2
CLCN3-210ENST00000515420 PRR33A8MZF0 331 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 CYB561D2O14569 222 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 PRRG1O14668 218 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 EXOC3O60645 756 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 LRG1P02750 347 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 ANP32AP39687 249 aaKnown RBP13.77□□□□□ -0.21
CLCN3-210ENST00000515420 ARPP19P56211 112 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 MYO1EQ12965 1108 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 TMEM31Q5JXX7 168 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 TMEM86AQ8N2M4 240 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 GUF1Q8N442 669 aaKnown RBP13.77□□□□□ -0.21
CLCN3-210ENST00000515420 CSGALNACT2Q8N6G5 542 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 NXPE3Q969Y0 559 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 MFSD14AQ96MC6 490 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 GSDMAQ96QA5 445 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 NOTCH4Q99466 2003 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 CGRRF1Q99675 332 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 RMND1Q9NWS8 449 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 CHMP5Q9NZZ3 219 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 SIX4Q9UIU6 781 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 HOOK1Q9UJC3 728 aaKnown RBP13.77□□□□□ -0.21
CLCN3-210ENST00000515420 AGAP1Q9UPQ3 857 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 SORCS3Q9UPU3 1222 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 R3HCC1Q9Y3T6 440 aaKnown RBP13.77□□□□□ -0.21
CLCN3-210ENST00000515420 INSL5Q9Y5Q6 135 aa13.77□□□□□ -0.21
CLCN3-210ENST00000515420 TECTAO75443 2155 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 PTPRJQ12913 1337 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 MAPK13O15264 365 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 CCL16O15467 120 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 CALUO43852 315 aaPredicted RBP13.76□□□□□ -0.21
CLCN3-210ENST00000515420 N4BP1O75113 896 aaKnown RBP13.76□□□□□ -0.21
CLCN3-210ENST00000515420 SP100P23497 879 aaPredicted RBP13.76□□□□□ -0.21
CLCN3-210ENST00000515420 AP3M2P53677 418 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 ZXDAP98168 799 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 ADCY1Q08828 1119 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 PLD1Q13393 1074 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 MTMR3Q13615 1198 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 COBLL1Q53SF7 1204 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 RNF19BQ6ZMZ0 732 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 DPH6Q7L8W6 267 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 UBALD2Q8IYN6 164 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 THEM5Q8N1Q8 247 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 TOP6BLQ8N6T0 577 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 OR5B17Q8NGF7 314 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 SPATA20Q8TB22 786 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 C2orf15Q8WU43 125 aaKnown RBP13.76□□□□□ -0.21
CLCN3-210ENST00000515420 CYP4F11Q9HBI6 524 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 C11orf16Q9NQ32 467 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 IGSF9Q9P2J2 1179 aa13.76□□□□□ -0.21
CLCN3-210ENST00000515420 HUS1O60921 280 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 SMC2O95347 1197 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 SEC24AO95486 1093 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 NR3C1P04150 777 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 KRT19P08727 400 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 DLATP10515 647 aaKnown RBP13.75□□□□□ -0.21
CLCN3-210ENST00000515420 PTPN2P17706 415 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 TNNI1P19237 187 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 FSHRP23945 695 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 GBP2P32456 591 aaPredicted RBP13.75□□□□□ -0.21
CLCN3-210ENST00000515420 CLDN10P78369 228 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 ENPEPQ07075 957 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 SIGLEC14Q08ET2 396 aa13.75□□□□□ -0.21
CLCN3-210ENST00000515420 PABPC1LQ4VXU2 614 aaKnown RBP13.75□□□□□ -0.21
CLCN3-210ENST00000515420 WSCD1Q658N2 575 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms