RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 VWA8A3KMH1 1905 aa22.5■■□□□ 1.19
LSM6-207ENST00000515311 I3L4J1 428 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 SYN3O14994 580 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 HUS1O60921 280 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 CYP11A1P05108 521 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 FAM163BP0C2L3 166 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 ZNF75DP51815 510 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 LRMPQ12912 555 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 CUL2Q13617 745 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 KLHDC7AQ5VTJ3 777 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 SMYD5Q6GMV2 418 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 PHLDB3Q6NSJ2 640 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.49■■□□□ 1.19
LSM6-207ENST00000515311 ENOSF1Q7L5Y1 443 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 APPL2Q8NEU8 664 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 SPATA18Q8TC71 538 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 JAKMIP2Q96AA8 810 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 ELMO3Q96BJ8 720 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 MRFAP1L1Q96HT8 127 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 PCMTD1Q96MG8 357 aaPredicted RBP22.49■■□□□ 1.19
LSM6-207ENST00000515311 VN1R3Q9BXE9 311 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 GPR62Q9BZJ7 368 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 CYP3A43Q9HB55 503 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 FAM207AQ9NSI2 230 aaPredicted RBP22.49■■□□□ 1.19
LSM6-207ENST00000515311 FBXL5Q9UKA1 691 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 POLIQ9UNA4 740 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 LZTS1Q9Y250 596 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 TRIOBPQ9H2D6 2365 aa22.49■■□□□ 1.19
LSM6-207ENST00000515311 TACC1O75410 805 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 TYMPP19971 482 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 FGFR3P22607 806 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 KLK7P49862 253 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 MRE11P49959 708 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 UBE3AQ05086 875 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 SOWAHAQ2M3V2 549 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 FAM171A1Q5VUB5 890 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 ARHGEF19Q8IW93 802 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 TMEM86AQ8N2M4 240 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 PPM1KQ8N3J5 372 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 NEK11Q8NG66 645 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 MMS19Q96T76 1030 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 GANQ9H2C0 597 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 L1RE1Q9UN81 338 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 ITIH6Q6UXX5 1313 aa22.48■■□□□ 1.19
LSM6-207ENST00000515311 NOL4O94818 638 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 SOD2P04179 222 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 UCHL3P15374 230 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 APBA1Q02410 837 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 USP41Q3LFD5 358 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 SPRED2Q7Z698 418 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 VSTM4Q8IW00 320 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 PDCL2Q8N4E4 241 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 TTC39CQ8N584 583 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 FBXO22Q8NEZ5 403 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 IQCDQ96DY2 449 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 HERC2P3Q9BVR0 1158 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 SMYD3Q9H7B4 428 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 UBE2TQ9NPD8 197 aaPredicted RBP22.47■■□□□ 1.19
LSM6-207ENST00000515311 CHST7Q9NS84 486 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 MTUS1Q9ULD2 1270 aa22.47■■□□□ 1.19
LSM6-207ENST00000515311 MFAP3P55082 362 aa22.46■■□□□ 1.19
LSM6-207ENST00000515311 YWHAEP62258 255 aaKnown RBP22.46■■□□□ 1.19
LSM6-207ENST00000515311 FIGNQ5HY92 759 aa22.46■■□□□ 1.19
LSM6-207ENST00000515311 SPECC1LQ69YQ0 1117 aa22.46■■□□□ 1.19
LSM6-207ENST00000515311 SCARA5Q6ZMJ2 495 aa22.46■■□□□ 1.19
LSM6-207ENST00000515311 RRAGAQ7L523 313 aa22.46■■□□□ 1.19
LSM6-207ENST00000515311 METTL23Q86XA0 190 aa22.46■■□□□ 1.19
LSM6-207ENST00000515311 GPR65Q8IYL9 337 aa22.46■■□□□ 1.19
LSM6-207ENST00000515311 ADGRF2Q8IZF7 708 aa22.46■■□□□ 1.19
LSM6-207ENST00000515311 KREMEN1Q96MU8 473 aa22.46■■□□□ 1.19
LSM6-207ENST00000515311 ARID3AQ99856 593 aa22.46■■□□□ 1.19
LSM6-207ENST00000515311 NUP58Q9BVL2 599 aa22.46■■□□□ 1.19
LSM6-207ENST00000515311 NAA15Q9BXJ9 866 aaKnown RBP22.46■■□□□ 1.19
LSM6-207ENST00000515311 PUF60Q9UHX1 559 aaKnown RBP22.46■■□□□ 1.19
LSM6-207ENST00000515311 CHD7Q9P2D1 2997 aa22.46■■□□□ 1.19
LSM6-207ENST00000515311 TMEM265A0A087WTH1 108 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 H3BNC9 293 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 TRIM21P19474 475 aaKnown RBP22.45■■□□□ 1.18
LSM6-207ENST00000515311 WARSP23381 471 aaKnown RBP22.45■■□□□ 1.18
LSM6-207ENST00000515311 TKTP29401 623 aaKnown RBP22.45■■□□□ 1.18
LSM6-207ENST00000515311 INCA1Q0VD86 236 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 PTPN21Q16825 1174 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 WSCD1Q658N2 575 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 GJB7Q6PEY0 223 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 KBTBD7Q8WVZ9 684 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 TTPALQ9BTX7 342 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 EDEM3Q9BZQ6 932 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 SDCBP2Q9H190 292 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 CEP72Q9P209 647 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 DNAJC12Q9UKB3 198 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 FHOD1Q9Y613 1164 aa22.45■■□□□ 1.18
LSM6-207ENST00000515311 GABRDO14764 452 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 EPHB6O15197 1021 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 OAZ2O95190 189 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 WEE2P0C1S8 567 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 RAP1GAPP47736 663 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 LHX1P48742 406 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 COL4A4P53420 1690 aaPredicted RBP22.44■■□□□ 1.18
LSM6-207ENST00000515311 YWHAHQ04917 246 aaPredicted RBP22.44■■□□□ 1.18
LSM6-207ENST00000515311 OVOS1Q6IE37 1185 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms