RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 TRIP13Q15645 432 aaPredicted RBP7.86□□□□□ -1.15
CCDC30-214ENST00000514642 ZNF284Q2VY69 593 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 CELF3Q5SZQ8 465 aaKnown RBP7.86□□□□□ -1.15
CCDC30-214ENST00000514642 PSRC1Q6PGN9 363 aaPredicted RBP7.86□□□□□ -1.15
CCDC30-214ENST00000514642 LRRC43Q8N309 656 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 UBE2Q2Q8WVN8 375 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 WDR18Q9BV38 432 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 WNT8AQ9H1J5 351 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 MRPS17Q9Y2R5 130 aaKnown RBP7.86□□□□□ -1.15
CCDC30-214ENST00000514642 CDY2AQ9Y6F7 541 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 ROBO1Q9Y6N7 1651 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 KPNA7A9QM74 516 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 EBAG9O00559 213 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 TOM1L1O75674 476 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 LGALS2P05162 132 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 RHOCP08134 193 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 GPD1P21695 349 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 AAK1Q2M2I8 961 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 CCDC144BQ3MJ40 725 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 B4GALNT4Q76KP1 1039 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 PPP1R16AQ96I34 528 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 PDCD2LQ9BRP1 358 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 DESI2Q9BSY9 194 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 NLNQ9BYT8 704 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 WDCPQ9H6R7 721 aa7.86□□□□□ -1.15
CCDC30-214ENST00000514642 NDUFS3O75489 264 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 INHAP05111 366 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 TRIM49P0CI25 452 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 TRIM49CP0CI26 452 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 BRAFP15056 766 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 SHMT1P34896 483 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 RFX5P48382 616 aaPredicted RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 FPGSQ05932 587 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 PCBP1Q15365 356 aaKnown RBP eCLIP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 USP38Q8NB14 1042 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 UBXN6Q9BZV1 441 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 KCNQ5Q9NR82 932 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 SUN2Q9UH99 717 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 SLC12A8A0AV02 714 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 PDGFRAP16234 1089 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 FGFR2P21802 821 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 PRCPP42785 496 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 PEX6Q13608 980 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 BYSLQ13895 437 aaKnown RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 PIGHQ14442 188 aaPredicted RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 PLCL1Q15111 1095 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 KRT31Q15323 416 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 PRAMEF19Q5SWL8 479 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 CXCL17Q6UXB2 119 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 SLC30A10Q6XR72 485 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 C11orf57Q6ZUT1 292 aaPredicted RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 RPRD1AQ96P16 312 aaPredicted RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 AGPAT1Q99943 283 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 MRPS23Q9Y3D9 190 aaKnown RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 TTC36A6NLP5 189 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 GOLGA8KD6RF30 607 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 GOLGA8MH3BSY2 632 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 ELNP15502 786 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 SELPP16109 830 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 RENBPP51606 427 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 DR1Q01658 176 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 PDAP1Q13442 181 aaKnown RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 KIF19Q2TAC6 998 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 ZNF697Q5TEC3 545 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 HS6ST3Q8IZP7 471 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 SH2D3AQ9BRG2 576 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 TRIM15Q9C019 465 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 SNTG2Q9NY99 539 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 UTP6Q9NYH9 597 aaKnown RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 SLC39A10Q9ULF5 831 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 USH1CQ9Y6N9 552 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 POLR2EP19388 210 aaKnown RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 CAV1Q03135 178 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 HIST2H2ACQ16777 129 aaPredicted RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 MDH1BQ5I0G3 518 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 HIST2H2AA3Q6FI13 130 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 APOBEC3HQ6NTF7 200 aaKnown RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 C3orf67Q6ZVT6 689 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 ZNF677Q86XU0 584 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 RCOR2Q8IZ40 523 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 ACRBPQ8NEB7 543 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 C7orf25Q9BPX7 421 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 TARS2Q9BW92 718 aaKnown RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 PDGFDQ9GZP0 370 aaPredicted RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 CASS4Q9NQ75 786 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 FBXO10Q9UK96 956 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 SF3B1O75533 1304 aaKnown RBP eCLIP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 PP2D1A8MPX8 630 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 P4HA2O15460 535 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 FTCDO95954 541 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 IL1RL1Q01638 556 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 P3H1Q32P28 736 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 TIGD7Q6NT04 549 aaPredicted RBP7.85□□□□□ -1.15
CCDC30-214ENST00000514642 CPA6Q8N4T0 437 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 UBA3Q8TBC4 463 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 TSPAN17Q96FV3 270 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 DNAJC7Q99615 494 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 CCSER1Q9C0I3 900 aa7.85□□□□□ -1.15
CCDC30-214ENST00000514642 VPS28Q9UK41 221 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms