RNA–Protein interactions for RNA: ENST00000514455.5

RACK1-233, Transcript of receptor for activated C kinase 1, human

TSL 2 BASIC

Gene RACK1, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-233	ENST00000514455	ZBP1	Q9H171	429 aa		10.62	□□□□□ -0.71
RACK1-233	ENST00000514455	VRTN	Q9H8Y1	702 aa		10.62	□□□□□ -0.71
RACK1-233	ENST00000514455	NGRN	Q9NPE2	291 aa	Known RBP	10.62	□□□□□ -0.71
RACK1-233	ENST00000514455	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.62	□□□□□ -0.71	2e-10	■■■■■ 59.6
RACK1-233	ENST00000514455	MRPL17	Q9NRX2	175 aa	Known RBP	10.62	□□□□□ -0.71
RACK1-233	ENST00000514455	NXF1	Q9UBU9	619 aa	Known RBP	10.62	□□□□□ -0.71
RACK1-233	ENST00000514455	PCDHB8	Q9UN66	801 aa		10.62	□□□□□ -0.71
RACK1-233	ENST00000514455	TIMM13	Q9Y5L4	95 aa	Predicted RBP	10.62	□□□□□ -0.71
RACK1-233	ENST00000514455	KIAA1671	Q9BY89	1806 aa		10.62	□□□□□ -0.71
RACK1-233	ENST00000514455	FSCN2	O14926	492 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	LILRB3	O75022	631 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	SERPINC1	P01008	464 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	CYP11A1	P05108	521 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	UROD	P06132	367 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	ODC1	P11926	461 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	P4HA1	P13674	534 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	TKT	P29401	623 aa	Known RBP	10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	CA8	P35219	290 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	GLUD2	P49448	558 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	FXR1	P51114	621 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	TNNC1	P63316	161 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	DSG1	Q02413	1049 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	CAMK1	Q14012	370 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	SMC1A	Q14683	1233 aa	Known RBP	10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	EXOC3L4	Q17RC7	722 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	SOWAHA	Q2M3V2	549 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	FILIP1L	Q4L180	1135 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	WSCD1	Q658N2	575 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	SPOPL	Q6IQ16	392 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	PDXDC1	Q6P996	788 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	GBP6	Q6ZN66	633 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	ANKS3	Q6ZW76	656 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	METTL23	Q86XA0	190 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	DEFB123	Q8N688	67 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	TOP6BL	Q8N6T0	577 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	MRPL43	Q8N983	215 aa	Known RBP	10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	LNX1	Q8TBB1	728 aa	Predicted RBP	10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	RIN2	Q8WYP3	895 aa	Predicted RBP	10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	TATDN2	Q93075	761 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	ELMO3	Q96BJ8	720 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	MRPL38	Q96DV4	380 aa	Known RBP	10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	FAXDC2	Q96IV6	333 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	B3GALT6	Q96L58	329 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	TCF25	Q9BQ70	676 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	ENTPD7	Q9NQZ7	604 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	LMCD1	Q9NZU5	365 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	DSE	Q9UL01	958 aa		10.61	□□□□□ -0.71
RACK1-233	ENST00000514455	GTPBP10	A4D1E9	387 aa	Known RBP	10.6	□□□□□ -0.71
RACK1-233	ENST00000514455		H7C4K7	107 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	C2CD2L	O14523	706 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	TACC1	O75410	805 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	OAZ2	O95190	189 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	CSPG5	O95196	566 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	POU3F3	P20264	500 aa	Predicted RBP	10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	IGFBP4	P22692	258 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	IRS1	P35568	1242 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	LHX1	P48742	406 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	CLCN6	P51797	869 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	NOP14	P78316	857 aa	Known RBP	10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	FANCC	Q00597	558 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	YWHAH	Q04917	246 aa	Predicted RBP	10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	LRMP	Q12912	555 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	MRPL58	Q14197	206 aa	Known RBP	10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	RTP2	Q5QGT7	225 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	VARS2	Q5ST30	1063 aa	Known RBP	10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	FKBP15	Q5T1M5	1219 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	PLPP4	Q5VZY2	271 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	OVOS1	Q6IE37	1185 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455		Q7L0L9	218 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	APTX	Q7Z2E3	356 aa	Known RBP	10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	LIMS2	Q7Z4I7	341 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	GAS2L3	Q86XJ1	694 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	THEM5	Q8N1Q8	247 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	TMEM86A	Q8N2M4	240 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	PDCL2	Q8N4E4	241 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	LMO3	Q8TAP4	145 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	SPATA18	Q8TC71	538 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	AUTS2	Q8WXX7	1259 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	PIK3R5	Q8WYR1	880 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	NT5C1B	Q96P26	610 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	GAS2L1	Q99501	681 aa	Predicted RBP	10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	EMILIN2	Q9BXX0	1053 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	RBSN	Q9H1K0	784 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	CYP3A43	Q9HB55	503 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	RXFP1	Q9HBX9	757 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	APOBEC3G	Q9HC16	384 aa	Known RBP	10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	L1RE1	Q9UN81	338 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	POLI	Q9UNA4	740 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	IRAK3	Q9Y616	596 aa		10.6	□□□□□ -0.71
RACK1-233	ENST00000514455	PLXNA4	Q9HCM2	1894 aa		10.59	□□□□□ -0.71
RACK1-233	ENST00000514455	C2orf71	A6NGG8	1288 aa		10.59	□□□□□ -0.71
RACK1-233	ENST00000514455	LGALS16	A8MUM7	142 aa		10.59	□□□□□ -0.71
RACK1-233	ENST00000514455	WEE2	P0C1S8	567 aa		10.59	□□□□□ -0.71
RACK1-233	ENST00000514455	SLC9A1	P19634	815 aa		10.59	□□□□□ -0.71
RACK1-233	ENST00000514455	PON1	P27169	355 aa		10.59	□□□□□ -0.71
RACK1-233	ENST00000514455	GNL1	P36915	607 aa	Predicted RBP	10.59	□□□□□ -0.71
RACK1-233	ENST00000514455	CDH8	P55286	799 aa		10.59	□□□□□ -0.71
RACK1-233	ENST00000514455	UBASH3A	P57075	661 aa		10.59	□□□□□ -0.71
RACK1-233	ENST00000514455	UBXN1	Q04323	297 aa		10.59	□□□□□ -0.71

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