RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 LCP1P13796 627 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 ATP6V1C1P21283 382 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 KCNMA1Q12791 1236 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 THOC5Q13769 683 aaKnown RBP13.8□□□□□ -0.2
TCOF1-213ENST00000514442 SERPINI1Q99574 410 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 DMAP1Q9NPF5 467 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-213ENST00000514442 SENP1Q9P0U3 644 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 IP6K2Q9UHH9 426 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 FIS1Q9Y3D6 152 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 FNTAP49354 379 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 TSPY1Q01534 308 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 NCOA4Q13772 614 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 EPC2Q52LR7 807 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 SEZ6Q53EL9 994 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 PCGF5Q86SE9 256 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 TRIM74Q86UV6 250 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 TRIM73Q86UV7 250 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 POLR3CQ9BUI4 534 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-213ENST00000514442 TLR10Q9BXR5 811 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 CHORDC1Q9UHD1 332 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-213ENST00000514442 CAMTA1Q9Y6Y1 1673 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 PGK2P07205 417 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 RARBP10826 455 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 HUNKP57058 714 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 MXD4Q14582 209 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-213ENST00000514442 Q4G0T1 1027 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 CHST13Q8NET6 341 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 SLC35G2Q8TBE7 412 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 TTC17Q96AE7 1141 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 NSL1Q96IY1 281 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 PARK7Q99497 189 aaKnown RBP13.8□□□□□ -0.2
TCOF1-213ENST00000514442 XAB2Q9HCS7 855 aaKnown RBP13.8□□□□□ -0.2
TCOF1-213ENST00000514442 TMX2Q9Y320 296 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 SNX9Q9Y5X1 595 aa13.8□□□□□ -0.2
TCOF1-213ENST00000514442 PI4K2BG5E9Z4 385 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 ATMINO43313 823 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-213ENST00000514442 RTN3O95197 1032 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-213ENST00000514442 TCF7P36402 384 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-213ENST00000514442 ACTR2P61160 394 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 KYNUQ16719 465 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 HDAC11Q96DB2 347 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 TRABDQ9H4I3 376 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 ARHGAP20Q9P2F6 1191 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 KLHL8Q9P2G9 620 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-213ENST00000514442 EPS15L1Q9UBC2 864 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 FZD1Q9UP38 647 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-213ENST00000514442 IQANK1A0A1B0GTG1 560 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 VCAM1P19320 739 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 RGS7P49802 495 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 PEX5P50542 639 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 SNX30Q5VWJ9 437 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 TRIM59Q8IWR1 403 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 IQCKQ8N0W5 287 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 GPRC5AQ8NFJ5 357 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 TARS2Q9BW92 718 aaKnown RBP13.79□□□□□ -0.2
TCOF1-213ENST00000514442 TBC1D23Q9NUY8 699 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 RTN2O75298 545 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 TOM1L1O75674 476 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 ZNF189O75820 626 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-213ENST00000514442 SMNDC1O75940 238 aaKnown RBP eCLIP13.79□□□□□ -0.2
TCOF1-213ENST00000514442 BACE1P56817 501 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 DNAL1Q4LDG9 190 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 EFCAB12Q6NXP0 572 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 KLC3Q6P597 504 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 CRLF3Q8IUI8 442 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 CXorf38Q8TB03 319 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 RMDN2Q96LZ7 410 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 SIKE1Q9BRV8 207 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 RIOX1Q9H6W3 641 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 PFDN6O15212 129 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 MOCS2O96007 188 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-213ENST00000514442 MKRN4PQ13434 485 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-213ENST00000514442 TFDP2Q14188 446 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 RHOT1Q8IXI2 618 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 FBXL16Q8N461 479 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 ZBED2Q9BTP6 218 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 OSBPL7Q9BZF2 842 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 GOLPH3Q9H4A6 298 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 TACC3Q9Y6A5 838 aa13.79□□□□□ -0.2
TCOF1-213ENST00000514442 ADCY3O60266 1144 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 WFS1O76024 890 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 SLC25A27O95847 323 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 MX2P20592 715 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 XPAP23025 273 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-213ENST00000514442 PTPN4P29074 926 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 SREBF1P36956 1147 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 C9orf131Q5VYM1 1079 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 C1orf131Q8NDD1 294 aaKnown RBP13.78□□□□□ -0.2
TCOF1-213ENST00000514442 GMCL1Q96IK5 515 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 MAML3Q96JK9 1138 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 MTFR1LQ9H019 292 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 KLC2Q9H0B6 622 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 DHX35Q9H5Z1 703 aaKnown RBP13.78□□□□□ -0.2
TCOF1-213ENST00000514442 LRRC10BA6NIK2 292 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 HIC1Q14526 733 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 C1orf228Q6PIY5 440 aa13.78□□□□□ -0.2
TCOF1-213ENST00000514442 SCG3Q8WXD2 468 aaKnown RBP13.78□□□□□ -0.2
TCOF1-213ENST00000514442 NMD3Q96D46 503 aaKnown RBP13.78□□□□□ -0.2
TCOF1-213ENST00000514442 WNT8AQ9H1J5 351 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms