RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	PDCD2	Q16342	344 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CRB2	Q5IJ48	1285 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FAM47A	Q5JRC9	791 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	APOA5	Q6Q788	366 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CPXCR1	Q8N123	301 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ANKRD42	Q8N9B4	389 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	OR2I1P	Q8NGU4	316 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CASKIN2	Q8WXE0	1202 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ANKS1A	Q92625	1134 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	KAT5	Q92993	513 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SUCLG2	Q96I99	432 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MRGPRX4	Q96LA9	322 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RIPOR3	Q96MK2	946 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	NAP1L4	Q99733	375 aa	Known RBP	4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	COLEC11	Q9BWP8	271 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	LSM14B	Q9BX40	385 aa	Known RBP	4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	UNK	Q9C0B0	810 aa	Known RBP	4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TOR3A	Q9H497	397 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CYP4F11	Q9HBI6	524 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	LANCL2	Q9NS86	450 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	LMBRD1	Q9NUN5	540 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TDP1	Q9NUW8	608 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	GNL3L	Q9NVN8	582 aa	Known RBP	4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	POGK	Q9P215	609 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	C11orf21	Q9P2W6	132 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ING1	Q9UK53	422 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PACSIN3	Q9UKS6	424 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	LRCH1	Q9Y2L9	728 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PCDHA13	Q9Y5I0	950 aa		4.17	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TMEM200C	A6NKL6	621 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	STC2	O76061	302 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	GC	P02774	474 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ALAS1	P13196	640 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	HAL	P42357	657 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PER3	P56645	1201 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CLRN1	P58418	232 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ERCC6L	Q2NKX8	1250 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SPDYE7P	Q495Y7	208 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	IZUMO3	Q5VZ72	239 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	IGFL4	Q6B9Z1	124 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	HEATR3	Q7Z4Q2	680 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ARHGEF19	Q8IW93	802 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	RHOT1	Q8IXI2	618 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	NKAP	Q8N5F7	415 aa	Known RBP	4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	PLBD2	Q8NHP8	589 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	POF1B	Q8WVV4	589 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	BRI3BP	Q8WY22	251 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	SLC35A4	Q96G79	324 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CLPTM1L	Q96KA5	538 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	MSLNL	Q96KJ4	702 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	COQ10A	Q96MF6	247 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	UHRF1	Q96T88	793 aa	Predicted RBP	4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	APOL5	Q9BWW9	433 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CPEB1	Q9BZB8	566 aa	Known RBP	4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	WDR12	Q9GZL7	423 aa	Known RBP	4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	IKZF4	Q9H2S9	585 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	WDCP	Q9H6R7	721 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ATP6V0A4	Q9HBG4	840 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	KIAA1586	Q9HCI6	787 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	AKIP1	Q9NQ31	210 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CASS4	Q9NQ75	786 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TMEM140	Q9NV12	185 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	TRPM5	Q9NZQ8	1165 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FNIP2	Q9P278	1114 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	ANAPC4	Q9UJX5	808 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	CHST2	Q9Y4C5	530 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	HS3ST4	Q9Y661	456 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267	FPGT-TNNI3K	V9GXZ4	949 aa		4.16	□□□□□ -1.74
CALCOCO2-223	ENST00000514267		A0A1W2PPL8	197 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	hCG_1642624	A0A1W2PR95	340 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267		H3BUI4	141 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MYO1F	O00160	1098 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NPHP1	O15259	732 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	RPS6KA4	O75676	772 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TYR	P14679	529 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TNFSF4	P23510	183 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	GUCY1B3	Q02153	619 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TNFAIP2	Q03169	654 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ZNF543	Q08ER8	600 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PLS1	Q14651	629 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	DACT2	Q5SW24	774 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ABHD17B	Q5VST6	288 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ABHD15	Q6UXT9	468 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	RSPH3	Q86UC2	560 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SUPT20H	Q8NEM7	779 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	IL31RA	Q8NI17	732 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NELL1	Q92832	810 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SCLT1	Q96NL6	688 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	DMRTA2	Q96SC8	542 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TTPAL	Q9BTX7	342 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	RNPEP	Q9H4A4	650 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ZMAT3	Q9HA38	289 aa	Known RBP	4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PNPLA8	Q9NP80	782 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PNPO	Q9NVS9	261 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	LUZP4	Q9P127	313 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ZNF69	Q9UC07	566 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ATP11B	Q9Y2G3	1177 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms