RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 PROZP22891 400 aa22.17■■□□□ 1.14
SQSTM1-215ENST00000514093 RAP1GAPP47736 663 aa22.17■■□□□ 1.14
SQSTM1-215ENST00000514093 CDR1P51861 262 aa22.17■■□□□ 1.14
SQSTM1-215ENST00000514093 GUCY1B3Q02153 619 aa22.17■■□□□ 1.14
SQSTM1-215ENST00000514093 ME3Q16798 604 aa22.17■■□□□ 1.14
SQSTM1-215ENST00000514093 GPR158Q5T848 1215 aa22.17■■□□□ 1.14
SQSTM1-215ENST00000514093 MPZL3Q6UWV2 235 aa22.17■■□□□ 1.14
SQSTM1-215ENST00000514093 HAUS6Q7Z4H7 955 aa22.17■■□□□ 1.14
SQSTM1-215ENST00000514093 NSUN7Q8NE18 718 aaKnown RBP22.17■■□□□ 1.14
SQSTM1-215ENST00000514093 LOXL4Q96JB6 756 aa22.17■■□□□ 1.14
SQSTM1-215ENST00000514093 POLR3BQ9NW08 1133 aaPredicted RBP22.17■■□□□ 1.14
SQSTM1-215ENST00000514093 OAZ2O95190 189 aa22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 PRAMEF12O95522 483 aa22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 ALDH1A3P47895 512 aa22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 CACNB1Q02641 598 aaPredicted RBP22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 PLD1Q13393 1074 aa22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 TCEAL6Q6IPX3 200 aa22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 DNAJB7Q7Z6W7 309 aaPredicted RBP22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 DAW1Q8N136 415 aa22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 SYNPOQ8N3V7 929 aa22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 TTC9BQ8N6N2 239 aa22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 ATAD1Q8NBU5 361 aa22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 TCEAL3Q969E4 200 aa22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 GTF3C6Q969F1 213 aa22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 LSM14BQ9BX40 385 aaKnown RBP22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 SMG9Q9H0W8 520 aaKnown RBP22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 KMT5AQ9NQR1 393 aa22.16■■□□□ 1.14
SQSTM1-215ENST00000514093 CITO14578 2027 aa22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 M0QZQ0 153 aa22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 HIP1RO75146 1068 aa22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 PROS1P07225 676 aa22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 GABRR2P28476 465 aa22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 DMP1Q13316 513 aaPredicted RBP22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 PLA2G2CQ5R387 149 aa22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 HAUS3Q68CZ6 603 aa22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 CENPPQ6IPU0 288 aa22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 PSAPL1Q6NUJ1 521 aa22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 SH2B1Q9NRF2 756 aaPredicted RBP22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 DDX19AQ9NUU7 478 aaKnown RBP22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 ARHGAP28Q9P2N2 729 aa22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 ANKFY1Q9P2R3 1169 aa22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 KIF26AQ9ULI4 1882 aaPredicted RBP22.15■■□□□ 1.14
SQSTM1-215ENST00000514093 CEP295Q9C0D2 2601 aa22.14■■□□□ 1.14
SQSTM1-215ENST00000514093 SFI1A8K8P3 1242 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 C1QTNF9BB2RNN3 333 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 E9PMD0 336 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 SLC16A4O15374 487 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 C1QTNF9P0C862 333 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 MUTP22033 750 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 MPLP40238 635 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 CYP4F8P98187 520 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 GPR17Q13304 367 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 COL9A2Q14055 689 aaPredicted RBP22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 USP37Q86T82 979 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 BPIFB1Q8TDL5 484 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 TMEM209Q96SK2 561 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 SLC8A2Q9UPR5 921 aa22.14■■□□□ 1.13
SQSTM1-215ENST00000514093 MTMR11A4FU01 709 aa22.13■■□□□ 1.13
SQSTM1-215ENST00000514093 GUCY2FP51841 1108 aa22.13■■□□□ 1.13
SQSTM1-215ENST00000514093 ANKRD1Q15327 319 aa22.13■■□□□ 1.13
SQSTM1-215ENST00000514093 ITPRIPL2Q3MIP1 535 aa22.13■■□□□ 1.13
SQSTM1-215ENST00000514093 RNF43Q68DV7 783 aa22.13■■□□□ 1.13
SQSTM1-215ENST00000514093 DSTYKQ6XUX3 929 aa22.13■■□□□ 1.13
SQSTM1-215ENST00000514093 PSMG2Q969U7 264 aa22.13■■□□□ 1.13
SQSTM1-215ENST00000514093 LPIN3Q9BQK8 851 aa22.13■■□□□ 1.13
SQSTM1-215ENST00000514093 OBP2AQ9NY56 170 aa22.13■■□□□ 1.13
SQSTM1-215ENST00000514093 BAHCC1Q9P281 2608 aa22.12■■□□□ 1.13
SQSTM1-215ENST00000514093 GIPC1O14908 333 aa22.12■■□□□ 1.13
SQSTM1-215ENST00000514093 CXCL8P10145 99 aa22.12■■□□□ 1.13
SQSTM1-215ENST00000514093 HOXB3P14651 431 aaPredicted RBP22.12■■□□□ 1.13
SQSTM1-215ENST00000514093 ARHGAP15Q53QZ3 475 aa22.12■■□□□ 1.13
SQSTM1-215ENST00000514093 FSTL4Q6MZW2 842 aa22.12■■□□□ 1.13
SQSTM1-215ENST00000514093 RUSC1Q9BVN2 902 aa22.12■■□□□ 1.13
SQSTM1-215ENST00000514093 GKN1Q9NS71 199 aa22.12■■□□□ 1.13
SQSTM1-215ENST00000514093 LRWD1Q9UFC0 647 aa22.12■■□□□ 1.13
SQSTM1-215ENST00000514093 ZMIZ1Q9ULJ6 1067 aa22.12■■□□□ 1.13
SQSTM1-215ENST00000514093 RBM19Q9Y4C8 960 aaKnown RBP22.12■■□□□ 1.13
SQSTM1-215ENST00000514093 SPAG17Q6Q759 2223 aa22.11■■□□□ 1.13
SQSTM1-215ENST00000514093 OR6C75A6NL08 312 aa22.11■■□□□ 1.13
SQSTM1-215ENST00000514093 PLCB2Q00722 1185 aa22.11■■□□□ 1.13
SQSTM1-215ENST00000514093 MAPK7Q13164 816 aa22.11■■□□□ 1.13
SQSTM1-215ENST00000514093 NOLC1Q14978 699 aaKnown RBP eCLIP22.11■■□□□ 1.13
SQSTM1-215ENST00000514093 KIF12Q96FN5 646 aa22.11■■□□□ 1.13
SQSTM1-215ENST00000514093 VPS45Q9NRW7 570 aa22.11■■□□□ 1.13
SQSTM1-215ENST00000514093 ASB3Q9Y575 518 aa22.11■■□□□ 1.13
SQSTM1-215ENST00000514093 PCDHGA5Q9Y5G8 931 aa22.11■■□□□ 1.13
SQSTM1-215ENST00000514093 ATG2BQ96BY7 2078 aa22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 CCDC163A0A0D9SF12 145 aa22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 OTOL1A6NHN0 477 aaPredicted RBP22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 DCLK1O15075 740 aa22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 TOM1L1O75674 476 aa22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 SPINK2P20155 84 aa22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 LRPAP1P30533 357 aa22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 GRSF1Q12849 480 aaKnown RBP eCLIP22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 NBR1Q14596 966 aa22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 SAFBQ15424 915 aaKnown RBP eCLIP22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 PLK5Q496M5 336 aa22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 TMEM196Q5HYL7 178 aa22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 TRIM68Q6AZZ1 485 aa22.1■■□□□ 1.13
SQSTM1-215ENST00000514093 OVOS1Q6IE37 1185 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms