RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 ZNF572Q7Z3I7 529 aaPredicted RBP13.7□□□□□ -0.22
PVT1-203ENST00000513868 DAAM2Q86T65 1068 aa13.7□□□□□ -0.22
PVT1-203ENST00000513868 PASD1Q8IV76 773 aa13.7□□□□□ -0.22
PVT1-203ENST00000513868 SLC43A3Q8NBI5 491 aa13.7□□□□□ -0.22
PVT1-203ENST00000513868 UBXN4Q92575 508 aa13.7□□□□□ -0.22
PVT1-203ENST00000513868 TWNKQ96RR1 684 aa13.7□□□□□ -0.22
PVT1-203ENST00000513868 TSPAN18Q96SJ8 248 aa13.7□□□□□ -0.22
PVT1-203ENST00000513868 CYP3A43Q9HB55 503 aa13.7□□□□□ -0.22
PVT1-203ENST00000513868 ERVK-5Q9HDB9 667 aa13.7□□□□□ -0.22
PVT1-203ENST00000513868 CHST12Q9NRB3 414 aa13.7□□□□□ -0.22
PVT1-203ENST00000513868 HMGXB4Q9UGU5 601 aa13.7□□□□□ -0.22
PVT1-203ENST00000513868 CTAGE15A4D2H0 777 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 CTAGE8P0CG41 777 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 ZSCAN20P17040 1043 aaPredicted RBP13.69□□□□□ -0.22
PVT1-203ENST00000513868 INCA1Q0VD86 236 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 PTP4A2Q12974 167 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 NFX1Q12986 1120 aaKnown RBP13.69□□□□□ -0.22
PVT1-203ENST00000513868 C9orf57Q5W0N0 161 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 CTAGE6Q86UF2 777 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 PHF13Q86YI8 300 aaPredicted RBP13.69□□□□□ -0.22
PVT1-203ENST00000513868 CTAGE4Q8IX94 777 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 SYCE1Q8N0S2 351 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 WDTC1Q8N5D0 677 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 SLC4A11Q8NBS3 891 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 BEST2Q8NFU1 509 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 ZNF653Q96CK0 615 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 HES6Q96HZ4 224 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 CALR3Q96L12 384 aaKnown RBP13.69□□□□□ -0.22
PVT1-203ENST00000513868 GLT1D1Q96MS3 346 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 ELOVL4Q9GZR5 314 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 EPC1Q9H2F5 836 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 CTTNBP2NLQ9P2B4 639 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 PARP2Q9UGN5 583 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 UBQLN1Q9UMX0 589 aaKnown RBP13.69□□□□□ -0.22
PVT1-203ENST00000513868 PCDHGC3Q9UN70 934 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 A0A1W2PQ45 241 aaPredicted RBP13.69□□□□□ -0.22
PVT1-203ENST00000513868 A0A1W2PQY0 241 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 MEIS3P2A8K0S8 358 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 PIRO00625 290 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 PTGESO14684 152 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 GPR182O15218 404 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 PAEPP09466 180 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 CDH5P33151 784 aaPredicted RBP13.69□□□□□ -0.22
PVT1-203ENST00000513868 SOX4Q06945 474 aaPredicted RBP13.69□□□□□ -0.22
PVT1-203ENST00000513868 LPIN1Q14693 890 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 RPS6KA1Q15418 735 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 PTPROQ16827 1216 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 C2CD6Q53TS8 623 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 TEX35Q5T0J7 233 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 PEX26Q7Z412 305 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 LRRC52Q8N7C0 313 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 NOA1Q8NC60 698 aaKnown RBP13.69□□□□□ -0.22
PVT1-203ENST00000513868 GSTCDQ8NEC7 633 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 RABGGTAQ92696 567 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 GOLGA1Q92805 767 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 NUP85Q9BW27 656 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 AVENQ9NQS1 362 aaPredicted RBP13.69□□□□□ -0.22
PVT1-203ENST00000513868 FAM105AQ9NUU6 356 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 EHD2Q9NZN4 543 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 CNOT8Q9UFF9 292 aaKnown RBP13.69□□□□□ -0.22
PVT1-203ENST00000513868 PADI3Q9ULW8 664 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 TRIM17Q9Y577 477 aa13.69□□□□□ -0.22
PVT1-203ENST00000513868 MGEA5O60502 916 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 P4HA1P13674 534 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 RRM1P23921 792 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 CD52P31358 61 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 NSFP46459 744 aaKnown RBP13.68□□□□□ -0.22
PVT1-203ENST00000513868 CKAP4Q07065 602 aaKnown RBP13.68□□□□□ -0.22
PVT1-203ENST00000513868 ORC1Q13415 861 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 DSC3Q14574 896 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 C11orf63Q6NUN7 778 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 LLGL2Q6P1M3 1020 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 TRAF7Q6Q0C0 670 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 ZNF564Q8TBZ8 553 aaPredicted RBP13.68□□□□□ -0.22
PVT1-203ENST00000513868 SH3TC2Q8TF17 1288 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 MS4A14Q96JA4 679 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 VCPIP1Q96JH7 1222 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.68□□□□□ -0.224e-6■■□□□ 12.8
PVT1-203ENST00000513868 TRPV6Q9H1D0 765 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 PDCL3Q9H2J4 239 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 FAM124BQ9H5Z6 455 aaPredicted RBP13.68□□□□□ -0.22
PVT1-203ENST00000513868 SMARCAL1Q9NZC9 954 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 UVRAGQ9P2Y5 699 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 NME7Q9Y5B8 376 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 ALG6Q9Y672 507 aa13.68□□□□□ -0.22
PVT1-203ENST00000513868 CES2O00748 559 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 DDX3YO15523 660 aaKnown RBP13.67□□□□□ -0.22
PVT1-203ENST00000513868 LSM8O95777 96 aaKnown RBP13.67□□□□□ -0.22
PVT1-203ENST00000513868 CD4P01730 458 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 MYBL1P10243 752 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 GHRP10912 638 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 CYP3A5P20815 502 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 DNA2P51530 1060 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 TNNC1P63316 161 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 MYO1EQ12965 1108 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 ZNF618Q5T7W0 954 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 MRPL10Q7Z7H8 261 aaKnown RBP13.67□□□□□ -0.22
PVT1-203ENST00000513868 TMEM176AQ96HP8 235 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 BTBD6Q96KE9 485 aa13.67□□□□□ -0.22
PVT1-203ENST00000513868 ZFP42Q96MM3 310 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms