RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TBX21Q9UL17 535 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 MTCH2Q9Y6C9 303 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 RFX7Q2KHR2 1363 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 MYH13Q9UKX3 1938 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 XIRP2A4UGR9 3374 aa4.48□□□□□ -1.69
PDLIM5-218ENST00000513341 PDS5AQ29RF7 1337 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 ATAD5Q96QE3 1844 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 PQBP1O60828 265 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 RHBDL3P58872 404 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 PICALMQ13492 652 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 COG2Q14746 738 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 GRM7Q14831 915 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 TBR1Q16650 682 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 LRRC24Q50LG9 513 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 SLC35F1Q5T1Q4 408 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 ZKSCAN2Q63HK3 967 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 SGMS1Q86VZ5 419 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 FAM178BQ8IXR5 827 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 PCSK9Q8NBP7 692 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 KAZALD1Q96I82 304 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 SHDQ96IW2 340 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 GLT1D1Q96MS3 346 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 ACBD3Q9H3P7 528 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 DDX4Q9NQI0 724 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 STARD7Q9NQZ5 370 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 STRIP2Q9ULQ0 834 aa4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 PRRC2BQ5JSZ5 2229 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-218ENST00000513341 ZNFX1Q9P2E3 1918 aaKnown RBP4.46□□□□□ -1.69
PDLIM5-218ENST00000513341 SPTBN4Q9H254 2564 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 ESYT3A0FGR9 886 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 EYA2O00167 538 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 APAF1O14727 1248 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 CNMDO75829 334 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 CAPNS1P04632 268 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 CSF2RAP15509 400 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 ADORA2AP29274 412 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 PTGS2P35354 604 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 BTDP43251 543 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 ACLYP53396 1101 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 GSTO1P78417 241 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 RRP1BQ14684 758 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 NOLC1Q14978 699 aaKnown RBP eCLIP4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 PPP2R5EQ16537 467 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 WDR78Q5VTH9 848 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 ATF7IPQ6VMQ6 1270 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 USP30Q70CQ3 517 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 BMP8AQ7Z5Y6 402 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 ZNF227Q86WZ6 799 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 GPR135Q8IZ08 494 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 MSL3Q8N5Y2 521 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 MB21D1Q8N884 522 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 KLHDC9Q8NEP7 349 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 PHOSPHO2Q8TCD6 241 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 MAML3Q96JK9 1138 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 UIMC1Q96RL1 719 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 UPF3BQ9BZI7 483 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 GPR27Q9NS67 375 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 LRRC37A2A6NM11 1700 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 MROH7-TTC4A0A0A0MT08 1334 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 IL16Q14005 1332 aa4.46□□□□□ -1.7
PDLIM5-218ENST00000513341 GBF1Q92538 1859 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 ROBO3Q96MS0 1386 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 ZDBF2Q9HCK1 2354 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 ZNF236Q9UL36 1845 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 KIF28PB7ZC32 967 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 MASP2O00187 686 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 ARVCFO00192 962 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 TBX1O43435 398 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 DCXO43602 365 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 NUDT3O95989 172 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 CD4P01730 458 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 PFKMP08237 780 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 NBPF7P0C2Y1 421 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 FCER1AP12319 257 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 AKR1A1P14550 325 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 CST5P28325 142 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 SLC25A3Q00325 362 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 ARID5AQ03989 594 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 EIF4HQ15056 248 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 SF3A1Q15459 793 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 LEXMQ3ZCV2 418 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 NAALADL2Q58DX5 795 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 FAM47AQ5JRC9 791 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 PRAMEF19Q5SWL8 479 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 ANO1Q5XXA6 986 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 TRIM68Q6AZZ1 485 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 CCSAPQ6IQ19 270 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 RSPO2Q6UXX9 243 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 DZIP1Q86YF9 867 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 D2HGDHQ8N465 521 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 SUCLG2Q96I99 432 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 TINF2Q9BSI4 451 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 MOV10L1Q9BXT6 1211 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 KIAA1683Q9H0B3 1180 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 BTBD7Q9P203 1132 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 ABCF2Q9UG63 623 aa4.45□□□□□ -1.7
PDLIM5-218ENST00000513341 PRKAG3Q9UGI9 489 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms