RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 TMEM39AQ9NV64 488 aa10.02□□□□□ -0.81
DHFR-206ENST00000513048 TRMT1Q9NXH9 659 aaKnown RBP10.02□□□□□ -0.81
DHFR-206ENST00000513048 AKR1B10O60218 316 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 B4GALT3O60512 393 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 ABL1P00519 1130 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 THP07101 528 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 WEE2P0C1S8 567 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 CCDC175P0C221 793 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 CCDC172P0C7W6 258 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 CYP11B1P15538 503 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 RFC2P35250 354 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 USP8P40818 1118 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 RAP1GAPP47736 663 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 CDH8P55286 799 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 FMO1Q01740 532 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 INCA1Q0VD86 236 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 BMS1Q14692 1282 aaKnown RBP10.01□□□□□ -0.81
DHFR-206ENST00000513048 WDR72Q3MJ13 1102 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 CD300LGQ6UXG3 332 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 SCARA5Q6ZMJ2 495 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 NYAP1Q6ZVC0 841 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 PALB2Q86YC2 1186 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 RBBP8NLQ8NC74 664 aaPredicted RBP10.01□□□□□ -0.81
DHFR-206ENST00000513048 PCDHB18PQ96TA0 734 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 ZSWIM1Q9BR11 485 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 FAM124BQ9H5Z6 455 aaPredicted RBP10.01□□□□□ -0.81
DHFR-206ENST00000513048 SLC38A7Q9NVC3 462 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 TMEM161AQ9NX61 479 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 GDAP2Q9NXN4 497 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 CACNG4Q9UBN1 327 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 NXF1Q9UBU9 619 aaKnown RBP10.01□□□□□ -0.81
DHFR-206ENST00000513048 ADAMTS1Q9UHI8 967 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 NME7Q9Y5B8 376 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 PCDHB4Q9Y5E5 795 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.01□□□□□ -0.81
DHFR-206ENST00000513048 COL4A6Q14031 1691 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 DNAH12Q6ZR08 3092 aa10.01□□□□□ -0.81
DHFR-206ENST00000513048 PJA2O43164 708 aa10□□□□□ -0.81
DHFR-206ENST00000513048 ZSCAN12O43309 604 aa10□□□□□ -0.81
DHFR-206ENST00000513048 CILPO75339 1184 aa10□□□□□ -0.81
DHFR-206ENST00000513048 TIMP1P01033 207 aa10□□□□□ -0.81
DHFR-206ENST00000513048 FGFR1P11362 822 aa10□□□□□ -0.81
DHFR-206ENST00000513048 KRT5P13647 590 aa10□□□□□ -0.81
DHFR-206ENST00000513048 PNPLA4P41247 253 aa10□□□□□ -0.81
DHFR-206ENST00000513048 RAD23BP54727 409 aa10□□□□□ -0.81
DHFR-206ENST00000513048 KRT83P78385 493 aa10□□□□□ -0.81
DHFR-206ENST00000513048 CDR2Q01850 454 aa10□□□□□ -0.81
DHFR-206ENST00000513048 DSC1Q08554 894 aa10□□□□□ -0.81
DHFR-206ENST00000513048 MYO1EQ12965 1108 aa10□□□□□ -0.81
DHFR-206ENST00000513048 GRIK3Q13003 919 aa10□□□□□ -0.81
DHFR-206ENST00000513048 TMEM270Q6UE05 265 aa10□□□□□ -0.81
DHFR-206ENST00000513048 GLYCTKQ8IVS8 523 aa10□□□□□ -0.81
DHFR-206ENST00000513048 RPUSD2Q8IZ73 545 aaKnown RBP10□□□□□ -0.81
DHFR-206ENST00000513048 RNF169Q8NCN4 708 aa10□□□□□ -0.81
DHFR-206ENST00000513048 C3orf58Q8NDZ4 430 aa10□□□□□ -0.81
DHFR-206ENST00000513048 TWNKQ96RR1 684 aa10□□□□□ -0.81
DHFR-206ENST00000513048 RPS6KC1Q96S38 1066 aa10□□□□□ -0.81
DHFR-206ENST00000513048 ELOVL4Q9GZR5 314 aa10□□□□□ -0.81
DHFR-206ENST00000513048 LACRTQ9GZZ8 138 aa10□□□□□ -0.81
DHFR-206ENST00000513048 HMGXB4Q9UGU5 601 aa10□□□□□ -0.81
DHFR-206ENST00000513048 NAGPAQ9UK23 515 aa10□□□□□ -0.81
DHFR-206ENST00000513048 TFR2Q9UP52 801 aa10□□□□□ -0.81
DHFR-206ENST00000513048 PCDHA13Q9Y5I0 950 aa10□□□□□ -0.81
DHFR-206ENST00000513048 ATP8B3O60423 1300 aa10□□□□□ -0.81
DHFR-206ENST00000513048 KPNA7A9QM74 516 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 PODXLO00592 558 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 CCP110O43303 1012 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 POMCP01189 267 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 MMEP08473 750 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 CFHP08603 1231 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 CD58P19256 250 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 TNFAIP3P21580 790 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 RPL9P32969 192 aaKnown RBP9.99□□□□□ -0.81
DHFR-206ENST00000513048 MAGEA1P43355 309 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 AARSP49588 968 aaKnown RBP eCLIP9.99□□□□□ -0.818e-9■■■■■ 62.5
DHFR-206ENST00000513048 TAF6P49848 677 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 CLCNKBP51801 687 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 VAV2P52735 878 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 BPIFB4P59827 614 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 LILRA4P59901 499 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 YWHAEP62258 255 aaKnown RBP9.99□□□□□ -0.81
DHFR-206ENST00000513048 TUSC3Q13454 348 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 UPP1Q16831 310 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 SOWAHAQ2M3V2 549 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 NOMO2Q5JPE7 1267 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 CNKSR3Q6P9H4 555 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 DEFB128Q7Z7B8 93 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 SLC4A11Q8NBS3 891 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 KBTBD7Q8WVZ9 684 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 TFAP2BQ92481 460 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 ZNF560Q96MR9 790 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 CASD1Q96PB1 797 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 MRPL45Q9BRJ2 306 aaKnown RBP9.99□□□□□ -0.81
DHFR-206ENST00000513048 PAAF1Q9BRP4 392 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.99□□□□□ -0.81
DHFR-206ENST00000513048 DEF6Q9H4E7 631 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 TAS2R14Q9NYV8 317 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 TRIM10Q9UDY6 481 aa9.99□□□□□ -0.81
DHFR-206ENST00000513048 FNDC1Q4ZHG4 1894 aaPredicted RBP9.99□□□□□ -0.81
DHFR-206ENST00000513048 TSC2P49815 1807 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms