RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 FAM114A1Q8IWE2 563 aa13.73□□□□□ -0.21
CDK7-209ENST00000512985 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.73□□□□□ -0.21
CDK7-209ENST00000512985 TOP6BLQ8N6T0 577 aa13.73□□□□□ -0.21
CDK7-209ENST00000512985 TAF4BQ92750 862 aa13.73□□□□□ -0.21
CDK7-209ENST00000512985 POP1Q99575 1024 aaKnown RBP13.73□□□□□ -0.21
CDK7-209ENST00000512985 CLSTN3Q9BQT9 956 aa13.73□□□□□ -0.21
CDK7-209ENST00000512985 SFXN1Q9H9B4 322 aa13.73□□□□□ -0.21
CDK7-209ENST00000512985 TMEM8AQ9HCN3 771 aa13.73□□□□□ -0.21
CDK7-209ENST00000512985 ANO10Q9NW15 660 aa13.73□□□□□ -0.21
CDK7-209ENST00000512985 SNX9Q9Y5X1 595 aa13.73□□□□□ -0.21
CDK7-209ENST00000512985 CDY1Q9Y6F8 540 aa13.73□□□□□ -0.21
CDK7-209ENST00000512985 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
CDK7-209ENST00000512985 FAM163BP0C2L3 166 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 PRKCSHP14314 528 aaPredicted RBP13.72□□□□□ -0.21
CDK7-209ENST00000512985 CPB1P15086 417 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 OR1D2P34982 312 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 GTF2F1P35269 517 aaKnown RBP eCLIP13.72□□□□□ -0.21
CDK7-209ENST00000512985 PIK3CAP42336 1068 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 LHX1P48742 406 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 MYL7Q01449 175 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 TSPY1Q01534 308 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 NCOA4Q13772 614 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 MRPL58Q14197 206 aaKnown RBP13.72□□□□□ -0.21
CDK7-209ENST00000512985 ZNF699Q32M78 642 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 ZACNQ401N2 412 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 DCAF17Q5H9S7 520 aaPredicted RBP13.72□□□□□ -0.21
CDK7-209ENST00000512985 KRT39Q6A163 491 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 SLC8B1Q6J4K2 584 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 ANKRD54Q6NXT1 300 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 RBM43Q6ZSC3 357 aaKnown RBP13.72□□□□□ -0.21
CDK7-209ENST00000512985 PALB2Q86YC2 1186 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 GLYCTKQ8IVS8 523 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 ZNF461Q8TAF7 563 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 SLC22A17Q8WUG5 538 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 MMS19Q96T76 1030 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 MAN1C1Q9NR34 630 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 SIX4Q9UIU6 781 aa13.72□□□□□ -0.21
CDK7-209ENST00000512985 PTPRJQ12913 1337 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 PPEF2O14830 753 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 LINC01565O15544 149 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 TGM5O43548 720 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 C4BPAP04003 597 aaKnown RBP13.71□□□□□ -0.21
CDK7-209ENST00000512985 PCSK1P29120 753 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 MXI1P50539 228 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 PMS1P54277 932 aaKnown RBP13.71□□□□□ -0.21
CDK7-209ENST00000512985 STX17P56962 302 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 SMAD4Q13485 552 aaKnown RBP13.71□□□□□ -0.21
CDK7-209ENST00000512985 KCNC3Q14003 757 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 KLHL40Q2TBA0 621 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 UVSSAQ2YD98 709 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 WDR72Q3MJ13 1102 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 ZNF667Q5HYK9 610 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 TDRD10Q5VZ19 366 aaKnown RBP13.71□□□□□ -0.21
CDK7-209ENST00000512985 SV2AQ7L0J3 742 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 DCP1BQ8IZD4 617 aaKnown RBP13.71□□□□□ -0.21
CDK7-209ENST00000512985 KREMEN2Q8NCW0 462 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 RIPOR3Q96MK2 946 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 NECTIN4Q96NY8 510 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 SRRTQ9BXP5 876 aaKnown RBP13.71□□□□□ -0.21
CDK7-209ENST00000512985 NAT10Q9H0A0 1025 aaKnown RBP13.71□□□□□ -0.21
CDK7-209ENST00000512985 VRTNQ9H8Y1 702 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 ZDHHC7Q9NXF8 308 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 MAGEC2Q9UBF1 373 aaPredicted RBP13.71□□□□□ -0.21
CDK7-209ENST00000512985 FBXL5Q9UKA1 691 aa13.71□□□□□ -0.21
CDK7-209ENST00000512985 BARX2Q9UMQ3 279 aaPredicted RBP13.71□□□□□ -0.21
CDK7-209ENST00000512985 ATG2AQ2TAZ0 1938 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 H3BQ06 376 aaPredicted RBP13.7□□□□□ -0.22
CDK7-209ENST00000512985 SPTLC1O15269 473 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 XYLBO75191 536 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 TBX10O75333 385 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 GLP2RO95838 553 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 HNRNPA1P09651 372 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDK7-209ENST00000512985 TRIM49P0CI25 452 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 TRIM49CP0CI26 452 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 EPCAMP16422 314 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 RPL17P18621 184 aaKnown RBP13.7□□□□□ -0.22
CDK7-209ENST00000512985 MTHFRP42898 656 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 ARPP19P56211 112 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 MCCD1P59942 119 aaPredicted RBP13.7□□□□□ -0.22
CDK7-209ENST00000512985 DLG4P78352 724 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 STX1AQ16623 288 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 WDR44Q5JSH3 913 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 TJAP1Q5JTD0 557 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 CAVIN1Q6NZI2 390 aaKnown RBP13.7□□□□□ -0.22
CDK7-209ENST00000512985 C15orf39Q6ZRI6 1047 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 ADGRF2Q8IZF7 708 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 SMRP1Q8NCR6 262 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 CMASQ8NFW8 434 aaPredicted RBP13.7□□□□□ -0.22
CDK7-209ENST00000512985 CXorf38Q8TB03 319 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 C2orf15Q8WU43 125 aaKnown RBP13.7□□□□□ -0.22
CDK7-209ENST00000512985 ZNF516Q92618 1163 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 EEF2KMTQ96G04 330 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 BORCS6Q96GS4 357 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 FAXDC2Q96IV6 333 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 MSLNLQ96KJ4 702 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 ASB2Q96Q27 587 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 DUSP9Q99956 384 aaKnown RBP13.7□□□□□ -0.22
CDK7-209ENST00000512985 SNX25Q9H3E2 840 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 MMRN2Q9H8L6 949 aa13.7□□□□□ -0.22
CDK7-209ENST00000512985 AFF4Q9UHB7 1163 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms