RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 COG5Q9UP83 839 aa25.94■■□□□ 1.74
SPOCK3-221ENST00000512648 A0A1W2PQ45 241 aaPredicted RBP25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 A0A1W2PQY0 241 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 TLR3O15455 904 aaKnown RBP25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 MED7O43513 233 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 BUB1BO60566 1050 aaPredicted RBP25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 FAM163BP0C2L3 166 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 PNPLA4P41247 253 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 NSFP46459 744 aaKnown RBP25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 RAB27AP51159 221 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 GUCY2FP51841 1108 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 RAD23BP54727 409 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 TNNC1P63316 161 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 C1QBPQ07021 282 aaKnown RBP25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 RABGGTAQ92696 567 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 GOLGA1Q92805 767 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 CXCL16Q9H2A7 254 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 AGO3Q9H9G7 860 aaKnown RBP25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 CTTNBP2NLQ9P2B4 639 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 BARX2Q9UMQ3 279 aaPredicted RBP25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 NOD1Q9Y239 953 aa25.93■■□□□ 1.74
SPOCK3-221ENST00000512648 KIF4AO95239 1232 aa25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 FTCDO95954 541 aa25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 ZSCAN20P17040 1043 aaPredicted RBP25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 LRPAP1P30533 357 aa25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 NFX1Q12986 1120 aaKnown RBP25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 MON1BQ7L1V2 547 aa25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 DAAM2Q86T65 1068 aa25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 TMEM176AQ96HP8 235 aa25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 HES6Q96HZ4 224 aa25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 PBKQ96KB5 322 aa25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 RPS6KC1Q96S38 1066 aa25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 TRMT13Q9NUP7 481 aaKnown RBP25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 AMFRQ9UKV5 643 aa25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 PADI3Q9ULW8 664 aa25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 GIT1Q9Y2X7 761 aa25.92■■□□□ 1.74
SPOCK3-221ENST00000512648 SRGAP2O75044 1071 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 CALCAP01258 141 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 CTSHP09668 335 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 NAA35Q5VZE5 725 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 PEX26Q7Z412 305 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 TMEM35BQ8NCS4 154 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 ANKRD7Q92527 254 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 ZNF653Q96CK0 615 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 ZSWIM1Q9BR11 485 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 SMYD3Q9H7B4 428 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 STARD7Q9NQZ5 370 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 GDAP2Q9NXN4 497 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 TUBGCP4Q9UGJ1 667 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 PTPN22Q9Y2R2 807 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 ARVCFO00192 962 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 NCK2O43639 380 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 SKIP12755 728 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 CDH8P55286 799 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 LPIN1Q14693 890 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 SCARA5Q6ZMJ2 495 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 LIMS2Q7Z4I7 341 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 SLC4A11Q8NBS3 891 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 CPA5Q8WXQ8 436 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 C18orf25Q96B23 403 aaPredicted RBP25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 ZNF560Q96MR9 790 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 PPP1R10Q96QC0 940 aaKnown RBP25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 BEGAINQ9BUH8 593 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 APOL6Q9BWW8 343 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 SLC38A7Q9NVC3 462 aa25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 CNOT8Q9UFF9 292 aaKnown RBP25.91■■□□□ 1.74
SPOCK3-221ENST00000512648 CITO14578 2027 aa25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 VDRP11473 427 aa25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 ITGA4P13612 1032 aa25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 MMP8P22894 467 aa25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 CDK7P50613 346 aa25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 PTP4A2Q12974 167 aa25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 PAK2Q13177 524 aa25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 ERCC6LQ2NKX8 1250 aa25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 LIN9Q5TKA1 542 aa25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 COG1Q8WTW3 980 aa25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 TFAP2BQ92481 460 aa25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 MMS19Q96T76 1030 aa25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 PAK6Q9NQU5 681 aaPredicted RBP25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 PUF60Q9UHX1 559 aaKnown RBP25.9■■□□□ 1.74
SPOCK3-221ENST00000512648 KBTBD13C9JR72 458 aa25.89■■□□□ 1.73
SPOCK3-221ENST00000512648 DNM1LO00429 736 aa25.89■■□□□ 1.73
SPOCK3-221ENST00000512648 CFHP08603 1231 aa25.89■■□□□ 1.73
SPOCK3-221ENST00000512648 STILQ15468 1287 aa25.89■■□□□ 1.73
SPOCK3-221ENST00000512648 CNGA2Q16280 664 aa25.89■■□□□ 1.73
SPOCK3-221ENST00000512648 UNC93AQ86WB7 457 aa25.89■■□□□ 1.73
SPOCK3-221ENST00000512648 GPR161Q8N6U8 529 aaKnown RBP25.89■■□□□ 1.73
SPOCK3-221ENST00000512648 ZNF564Q8TBZ8 553 aaPredicted RBP25.89■■□□□ 1.73
SPOCK3-221ENST00000512648 NUP85Q9BW27 656 aa25.89■■□□□ 1.73
SPOCK3-221ENST00000512648 ELOVL4Q9GZR5 314 aa25.89■■□□□ 1.73
SPOCK3-221ENST00000512648 ADAM22Q9P0K1 906 aa25.89■■□□□ 1.73
SPOCK3-221ENST00000512648 A0A0U1RQF3 1178 aa25.88■■□□□ 1.73
SPOCK3-221ENST00000512648 MIF4GDA9UHW6 222 aaKnown RBP25.88■■□□□ 1.73
SPOCK3-221ENST00000512648 PTGESO14684 152 aa25.88■■□□□ 1.73
SPOCK3-221ENST00000512648 ZNF185O15231 689 aa25.88■■□□□ 1.73
SPOCK3-221ENST00000512648 BRD2P25440 801 aaKnown RBP25.88■■□□□ 1.73
SPOCK3-221ENST00000512648 CD52P31358 61 aa25.88■■□□□ 1.73
SPOCK3-221ENST00000512648 PAFAH1B1P43034 410 aa25.88■■□□□ 1.73
SPOCK3-221ENST00000512648 NAA30Q147X3 362 aaPredicted RBP25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms