RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 VASH1Q7L8A9 365 aaPredicted RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 ST13P4Q8IZP2 240 aaPredicted RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 ZNF280CQ8ND82 737 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 RNPC3Q96LT9 517 aaKnown RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 PPP1R2P1Q96PQ5 205 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 TUFT1Q9NNX1 390 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 SH3GLB1Q9Y371 365 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 MRFAP1Q9Y605 127 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 KIF14Q15058 1648 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 ZNF839A8K0R7 811 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 H3BMM5 538 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 MSH4O15457 936 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 RPLP2P05387 115 aaKnown RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 MSH3P20585 1137 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 NOS3P29474 1203 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 CASRP41180 1078 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 NBPF12Q5TAG4 269 aaPredicted RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 HIBCHQ6NVY1 386 aaPredicted RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 BRSK2Q8IWQ3 736 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 FIBCD1Q8N539 461 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 CCDC54Q8NEL0 328 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 TSPAN14Q8NG11 270 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 CXorf40AQ8TE69 158 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 VPS33AQ96AX1 596 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 RBM41Q96IZ5 413 aaKnown RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 GTPBP2Q9BX10 602 aaKnown RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 NFE2L3Q9Y4A8 694 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 IGSF9BQ9UPX0 1349 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 APOL1O14791 398 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 TADA3O75528 432 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 AKT2P31751 481 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 SCNN1AP37088 669 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 PPIL2Q13356 520 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 LRRC8EQ6NSJ5 796 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 SH3BP5LQ7L8J4 393 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 MYPNQ86TC9 1320 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 C17orf80Q9BSJ5 609 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 TUBB6Q9BUF5 446 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 NDRG2Q9UN36 371 aaKnown RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 GPSM3Q9Y4H4 160 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 STON1Q9Y6Q2 735 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 ABCC1P33527 1531 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 NPHP4O75161 1426 aaPredicted RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 PALLDQ8WX93 1383 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 IGSF1Q8N6C5 1336 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 PIK3R2O00459 728 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 MAPK13O15264 365 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 KPNA6O60684 536 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 NFKB1P19838 968 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 ROR1Q01973 937 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 UBXN2BQ14CS0 331 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 SUZ12Q15022 739 aaKnown RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 IYDQ6PHW0 289 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 CYP4Z1Q86W10 505 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 ENAHQ8N8S7 591 aaPredicted RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 KLHL23Q8NBE8 558 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 ZNF555Q8NEP9 628 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 OSBP2Q969R2 916 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 ZNF112Q9UJU3 913 aa9.33□□□□□ -0.92
VCAN-208ENST00000512590 APOBEC2Q9Y235 224 aaKnown RBP9.33□□□□□ -0.92
VCAN-208ENST00000512590 WWP2O00308 870 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 EEF2KO00418 725 aaKnown RBP9.32□□□□□ -0.92
VCAN-208ENST00000512590 VWA5AO00534 786 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 ZNF202O95125 648 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 MASP1P48740 699 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 AP3M2P53677 418 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 NPEPPSP55786 919 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 TMPRSS15P98073 1019 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 GPR158Q5T848 1215 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 ATAD3BQ5T9A4 648 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 PEG10Q86TG7 708 aaKnown RBP9.32□□□□□ -0.92
VCAN-208ENST00000512590 SSH3Q8TE77 659 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 BRD9Q9H8M2 597 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 TBK1Q9UHD2 729 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 MORC2Q9Y6X9 1032 aaPredicted RBP9.32□□□□□ -0.92
VCAN-208ENST00000512590 TAF4O00268 1085 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 RPS6KA4O75676 772 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 PLA2G4BP0C869 781 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 POLR2EP19388 210 aaKnown RBP9.32□□□□□ -0.92
VCAN-208ENST00000512590 HTR1BP28222 390 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 CYP2C19P33261 490 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 OXCT1P55809 520 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 BTKQ06187 659 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 ELAVL2Q12926 359 aaKnown RBP9.32□□□□□ -0.92
VCAN-208ENST00000512590 ZNF280DQ6N043 979 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 LRRC39Q96DD0 335 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 IL17RAQ96F46 866 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 AK8Q96MA6 479 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 ZCCHC2Q9C0B9 1178 aaKnown RBP9.32□□□□□ -0.92
VCAN-208ENST00000512590 GREM2Q9H772 168 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 E9PBE3 544 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 ANGPT2O15123 496 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 FLT3P36888 993 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 ME3Q16798 604 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 EDRF1Q3B7T1 1238 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 NOTUMQ6P988 496 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 TRIM72Q6ZMU5 477 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 RASSF6Q6ZTQ3 369 aa9.32□□□□□ -0.92
VCAN-208ENST00000512590 METTL21AQ8WXB1 218 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms