RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 LLGL2Q6P1M3 1020 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 METTL7BQ6UX53 244 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 SEPT14Q6ZU15 432 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 NIPA2Q8N8Q9 360 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 TMEM35BQ8NCS4 154 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 TCP11Q8WWU5 503 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 ARHGEF2Q92974 986 aaKnown RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 FAM212AQ96EL1 285 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 FAXDC2Q96IV6 333 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 CCDC114Q96M63 670 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 PRMT1Q99873 361 aaKnown RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 JPH2Q9BR39 696 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 CCDC77Q9BR77 488 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 HEMGNQ9BXL5 484 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 NSRP1Q9H0G5 558 aaKnown RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 PCDHGC3Q9UN70 934 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 SSC5DA1L4H1 1573 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 IGKV6-21A0A0C4DH24 114 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 CCT8L1PA6NM43 557 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 O00370 1275 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 DNM1LO00429 736 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 CDH16O75309 829 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 TJP3O95049 919 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 CST3P01034 146 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 FSTL1Q12841 308 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 PIGHQ14442 188 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 LLGL1Q15334 1064 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 KYNUQ16719 465 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 DUOXA2Q1HG44 320 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 C2CD6Q53TS8 623 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 PPP1R15BQ5SWA1 713 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 FBXW10Q5XX13 1052 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 ICE2Q659A1 982 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 PHLDB2Q86SQ0 1253 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 PASD1Q8IV76 773 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 RIBC1Q8N443 379 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 ZCCHC9Q8N567 271 aaKnown RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 UHMK1Q8TAS1 419 aaKnown RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 PRPF31Q8WWY3 499 aaKnown RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 ACO2Q99798 780 aaKnown RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 NINJ2Q9NZG7 142 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 SAMD15Q9P1V8 674 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 EFR3BQ9Y2G0 817 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 ABLIM1O14639 778 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 OGTO15294 1046 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 LIASO43766 372 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 GSTA1P08263 222 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 PRAMEF18Q5VWM3 479 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 KCNV1Q6PIU1 500 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 POTEAQ6S8J7 498 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 ANKS1BQ7Z6G8 1248 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 LRRC34Q8IZ02 419 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 SLITRK1Q96PX8 696 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 NIF3L1Q9GZT8 377 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 C2orf40Q9H1Z8 148 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 DDX56Q9NY93 547 aaKnown RBP9.78□□□□□ -0.84
CPNE4-210ENST00000512332 EURLQ9NYK6 297 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 CPSF3Q9UKF6 684 aaKnown RBP9.78□□□□□ -0.84
CPNE4-210ENST00000512332 SOWAHBA6NEL2 793 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 DNAJC8O75937 253 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-210ENST00000512332 SCTRP47872 440 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 RPL7AP62424 266 aaKnown RBP9.78□□□□□ -0.84
CPNE4-210ENST00000512332 NR1H3Q13133 447 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 XRCC4Q13426 336 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 MAPK6Q16659 721 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 CCDC142Q17RM4 750 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 EAPPQ56P03 285 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-210ENST00000512332 SWT1Q5T5J6 900 aaKnown RBP9.78□□□□□ -0.84
CPNE4-210ENST00000512332 IZUMO3Q5VZ72 239 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 VSTM1Q6UX27 236 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 PLPPR4Q7Z2D5 763 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 POLNQ7Z5Q5 900 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 DEFB132Q7Z7B7 95 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 NKD2Q969F2 451 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-210ENST00000512332 CISHQ9NSE2 258 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 GPRC5DQ9NZD1 345 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 STRIP2Q9ULQ0 834 aa9.78□□□□□ -0.84
CPNE4-210ENST00000512332 TMEM120BA0PK00 339 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 SNX3O60493 162 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 B4GALT4O60513 344 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 LGR5O75473 907 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 USP2O75604 605 aaPredicted RBP9.77□□□□□ -0.85
CPNE4-210ENST00000512332 CD58P19256 250 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 PROZP22891 400 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 TCF7P36402 384 aaPredicted RBP9.77□□□□□ -0.85
CPNE4-210ENST00000512332 SLC18A1P54219 525 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 MYL6P60660 151 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 YWHAEP62258 255 aaKnown RBP9.77□□□□□ -0.85
CPNE4-210ENST00000512332 PPARDQ03181 441 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 ZNF252P-AS1Q0IIN9 211 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 MKRN3Q13064 507 aaKnown RBP9.77□□□□□ -0.85
CPNE4-210ENST00000512332 RASA2Q15283 850 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 TRIP13Q15645 432 aaPredicted RBP9.77□□□□□ -0.85
CPNE4-210ENST00000512332 DAB2IPQ5VWQ8 1189 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 DNAJC24Q6P3W2 148 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 TSHZ1Q6ZSZ6 1077 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 TDRPQ86YL5 185 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 ZBTB8OSQ8IWT0 167 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 ALLCQ8N6M5 410 aa9.77□□□□□ -0.85
CPNE4-210ENST00000512332 TTC25Q96NG3 672 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms