RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 ACP6Q9NPH0 428 aa8.46□□□□□ -1.05
NEK1-208ENST00000512193 PCMTD2Q9NV79 361 aa8.46□□□□□ -1.05
NEK1-208ENST00000512193 TMX2Q9Y320 296 aa8.46□□□□□ -1.05
NEK1-208ENST00000512193 COL5A2P05997 1499 aaPredicted RBP8.46□□□□□ -1.06
NEK1-208ENST00000512193 CBWD6Q4V339 395 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 CBWD3Q5JTY5 395 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 CBWD5Q5RIA9 395 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 TMC3Q7Z5M5 1100 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 KAT5Q92993 513 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 SDCCAG3Q96C92 435 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 MMTAG2Q9BU76 263 aaKnown RBP8.46□□□□□ -1.06
NEK1-208ENST00000512193 DEFB129Q9H1M3 183 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 BAG5Q9UL15 447 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 ANGPTL3Q9Y5C1 460 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 PFDN1O60925 122 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 UBOX5O94941 541 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 TARSP26639 723 aaKnown RBP8.46□□□□□ -1.06
NEK1-208ENST00000512193 RHBDL3P58872 404 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 AP2B1P63010 937 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 AMPD2Q01433 879 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 STX3Q13277 289 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 TSTA3Q13630 321 aaPredicted RBP8.46□□□□□ -1.06
NEK1-208ENST00000512193 MXD4Q14582 209 aaPredicted RBP8.46□□□□□ -1.06
NEK1-208ENST00000512193 EFHC2Q5JST6 749 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 OTOP1Q7RTM1 612 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 KDELC2Q7Z4H8 507 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 LCA5Q86VQ0 697 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 ZNF677Q86XU0 584 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 ARHGEF19Q8IW93 802 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 TRIML2Q8N7C3 387 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 BAP1Q92560 729 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 ALKBH8Q96BT7 664 aaKnown RBP8.46□□□□□ -1.06
NEK1-208ENST00000512193 THTPAQ9BU02 230 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 DDX20Q9UHI6 824 aaKnown RBP8.46□□□□□ -1.06
NEK1-208ENST00000512193 SLC12A6Q9UHW9 1150 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 PCDHGC5Q9Y5F6 944 aa8.46□□□□□ -1.06
NEK1-208ENST00000512193 B2RBV5 119 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 MAFGO15525 162 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 MOCS2O96007 188 aaPredicted RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 RARRES1P49788 294 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 SH3BGRP55822 239 aaPredicted RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 SNRPFP62306 86 aaKnown RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 ESRRGP62508 458 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 HABP4Q5JVS0 413 aaKnown RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 KLC3Q6P597 504 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 ACAD11Q709F0 780 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 APOBEC3FQ8IUX4 373 aaKnown RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 TEX2Q8IWB9 1127 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 NDUFAF2Q8N183 169 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 OR6P1Q8NGX9 317 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 KRT35Q92764 455 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 MMP19Q99542 508 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 FSD1LQ9BXM9 530 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 FAM129AQ9BZQ8 928 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 KCNQ5Q9NR82 932 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 ADA2Q9NZK5 511 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 LOC100653049A0A140TA62 436 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 ASAP2O43150 1006 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 KRT34O76011 436 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 RPL21P46778 160 aaKnown RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 CTCFP49711 727 aaPredicted RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 RBP5P82980 135 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 TMEM62Q0P6H9 643 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 PLCB4Q15147 1175 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 KIF19Q2TAC6 998 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 ANGEL2Q5VTE6 544 aaKnown RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 AADACL2Q6P093 401 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 TNFRSF25Q93038 417 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 FAM163AQ96GL9 167 aaPredicted RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 UPF3AQ9H1J1 476 aaKnown RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 HSD3B7Q9H2F3 369 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 SUDS3Q9H7L9 328 aaPredicted RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 METTL5Q9NRN9 209 aaKnown RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 JCADQ9P266 1359 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 RIMS1Q86UR5 1692 aaKnown RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 TRIM49D1C9J1S8 452 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 RARAP10276 462 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 CCND1P24385 295 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 EEF1B2P24534 225 aaKnown RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 SLC12A3P55017 1021 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 CUL3Q13618 768 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 TTMPQ5BVD1 217 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 MROH9Q5TGP6 573 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 ATF7IP2Q5U623 682 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 ARID3BQ8IVW6 561 aaPredicted RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 NKX2-3Q8TAU0 364 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 SPIRE2Q8WWL2 714 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 ZKSCAN4Q969J2 545 aaPredicted RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 CLMNQ96JQ2 1002 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 TMEM121Q9BTD3 319 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 MTMR12Q9C0I1 747 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 GDF3Q9NR23 364 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 PNMA3Q9UL41 463 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 H3BRJ5 948 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 NEMP1O14524 444 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 GNGT2O14610 69 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 MYL3P08590 195 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 SNRPAP09012 282 aaKnown RBP8.45□□□□□ -1.06
NEK1-208ENST00000512193 RARBP10826 455 aa8.45□□□□□ -1.06
NEK1-208ENST00000512193 TMEM132DQ14C87 1099 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms