RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 SPG21Q9NZD8 308 aa7.47□□□□□ -1.21
COPS4-209ENST00000511653 PUF60Q9UHX1 559 aaKnown RBP7.47□□□□□ -1.21
COPS4-209ENST00000511653 CEP131Q9UPN4 1083 aa7.47□□□□□ -1.21
COPS4-209ENST00000511653 FANCMQ8IYD8 2048 aa7.46□□□□□ -1.21
COPS4-209ENST00000511653 A0A0U1RQF3 1178 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 WDR64B1ANS9 1081 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 SMAD7O15105 426 aaKnown RBP7.46□□□□□ -1.22
COPS4-209ENST00000511653 MAGEB2O15479 319 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 HTR3BO95264 441 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 EPCAMP16422 314 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 ZSCAN20P17040 1043 aaPredicted RBP7.46□□□□□ -1.22
COPS4-209ENST00000511653 HOXB8P17481 243 aaPredicted RBP7.46□□□□□ -1.22
COPS4-209ENST00000511653 CIITAP33076 1130 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 CA8P35219 290 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 GIPRP48546 466 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 ZNF165P49910 485 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 BCAR1P56945 870 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 SMC1AQ14683 1233 aaKnown RBP7.46□□□□□ -1.22
COPS4-209ENST00000511653 RARS2Q5T160 578 aaKnown RBP7.46□□□□□ -1.22
COPS4-209ENST00000511653 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.46□□□□□ -1.22
COPS4-209ENST00000511653 LSRQ86X29 649 aaPredicted RBP7.46□□□□□ -1.22
COPS4-209ENST00000511653 MRPL43Q8N983 215 aaKnown RBP7.46□□□□□ -1.22
COPS4-209ENST00000511653 CPLX3Q8WVH0 158 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 ATOH1Q92858 354 aaPredicted RBP7.46□□□□□ -1.22
COPS4-209ENST00000511653 ELMO3Q96BJ8 720 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 FAM167AQ96KS9 214 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 SCLT1Q96NL6 688 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 VN1R3Q9BXE9 311 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 ZBP1Q9H171 429 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 TNKS2Q9H2K2 1166 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 ADAM7Q9H2U9 754 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 UNC45AQ9H3U1 944 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 DISC1Q9NRI5 854 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 TCEAL9Q9UHQ7 104 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 SORCS3Q9UPU3 1222 aa7.46□□□□□ -1.22
COPS4-209ENST00000511653 CHD6Q8TD26 2715 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.45□□□□□ -1.22
COPS4-209ENST00000511653 ZC3H11AO75152 810 aaKnown RBP eCLIP7.45□□□□□ -1.22
COPS4-209ENST00000511653 ATE1O95260 518 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 RCAN1P53805 252 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 RAC1P63000 192 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 KRT17Q04695 432 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 TARBP2Q15633 366 aaKnown RBP7.45□□□□□ -1.22
COPS4-209ENST00000511653 NTRK3Q16288 839 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 BMP2KLQ5H9B9 411 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 FAM43BQ6ZT52 329 aaPredicted RBP7.45□□□□□ -1.22
COPS4-209ENST00000511653 Q6ZUG5 572 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 ASCL5Q7RTU5 278 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 VPS52Q8N1B4 723 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 SLC5A5Q92911 643 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 BRF1Q92994 677 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 TMEM169Q96HH4 297 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 CEP89Q96ST8 783 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 C6orf50Q9HD87 102 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 VPS54Q9P1Q0 977 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 REV1Q9UBZ9 1251 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 DNAJB4Q9UDY4 337 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 MKL2Q9ULH7 1088 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 NR2E1Q9Y466 385 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 MAP1BP46821 2468 aaKnown RBP7.45□□□□□ -1.22
COPS4-209ENST00000511653 MYH15Q9Y2K3 1946 aa7.45□□□□□ -1.22
COPS4-209ENST00000511653 CNOT1A5YKK6 2376 aaKnown RBP7.45□□□□□ -1.22
COPS4-209ENST00000511653 A0A087WZ62 844 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 GAS7O60861 476 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 STBD1O95210 358 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 TDP2O95551 362 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 CXCL14O95715 111 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 TMOD1P28289 359 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 ITIH3Q06033 890 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 MTERF2Q49AM1 385 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 LRCH2Q5VUJ6 765 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 CWF19L1Q69YN2 538 aaKnown RBP7.44□□□□□ -1.22
COPS4-209ENST00000511653 KIAA1841Q6NSI8 718 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 CES5AQ6NT32 575 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 KSR1Q8IVT5 923 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 CELF2-AS1Q8N7Q2 184 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 TDRD5Q8NAT2 981 aaKnown RBP7.44□□□□□ -1.22
COPS4-209ENST00000511653 ZSCAN1Q8NBB4 408 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 CCDC136Q96JN2 1154 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 NECTIN4Q96NY8 510 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 FANCD2OSQ96PS1 177 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 FDXACB1Q9BRP7 624 aaPredicted RBP7.44□□□□□ -1.22
COPS4-209ENST00000511653 MRPL9Q9BYD2 267 aaKnown RBP7.44□□□□□ -1.22
COPS4-209ENST00000511653 NRDE2Q9H7Z3 1164 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 FBRSQ9HAH7 460 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 RAD18Q9NS91 495 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 TBC1D13Q9NVG8 400 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 CRIM1Q9NZV1 1036 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 F5P12259 2224 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 KMT2BQ9UMN6 2715 aaPredicted RBP7.44□□□□□ -1.22
COPS4-209ENST00000511653 TRIP11Q15643 1979 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 IGKV6-21A0A0C4DH24 114 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 PRR23AA6NEV1 266 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 UPK3BL1B0FP48 263 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 UPK3BL2E5RIL1 263 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 PRPF3O43395 683 aaKnown RBP7.44□□□□□ -1.22
COPS4-209ENST00000511653 PSMD10O75832 226 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 EOMESO95936 686 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 MTHFRP42898 656 aa7.44□□□□□ -1.22
COPS4-209ENST00000511653 SLC11A1P49279 550 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms