RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 HEPHQ9BQS7 1158 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 SIK2Q9H0K1 926 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 DHX36Q9H2U1 1008 aaKnown RBP6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 GJB4Q9NTQ9 266 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 PDP2Q9P2J9 529 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 LRRFIP2Q9Y608 721 aaKnown RBP6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 A0A1B0GVC2 190 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 TBKBP1A7MCY6 615 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 ACKR2O00590 384 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 UNC5CO95185 931 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 ITGA5P08648 1049 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 PIM1P11309 404 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 COPAP53621 1224 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 RIN1Q13671 783 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 SPARCL1Q14515 664 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 ACAP1Q15027 740 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 RAB30Q15771 203 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 MCTP2Q6DN12 878 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 ZNF529Q6P280 563 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 RFX8Q6ZV50 586 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 DNAJC5GQ8N7S2 189 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 DNERQ8NFT8 737 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 FAM71BQ8TC56 605 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 DACT3Q96B18 629 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 SPATA5L1Q9BVQ7 753 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 TINAGL1Q9GZM7 467 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 OBP2BQ9NPH6 170 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 SLAMF7Q9NQ25 335 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 USP40Q9NVE5 1235 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 GRHPRQ9UBQ7 328 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 NR2E1Q9Y466 385 aa6.47□□□□□ -1.37
HMGB1P47-201ENST00000511281 A0A087WZ62 844 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 LGALS16A8MUM7 142 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 PRRT4C9JH25 899 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 KIAA0391O15091 583 aaKnown RBP6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 INMTO95050 263 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 POMCP01189 267 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 GRPP07492 148 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 PI3P19957 117 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 FDXRP22570 491 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 IL1R2P27930 398 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 DDIT3P35638 169 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 VIPR2P41587 438 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 PHKA1P46020 1223 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 UCP3P55916 312 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 MESP2Q0VG99 397 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 ZNF568Q3ZCX4 644 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 METTL24Q5JXM2 366 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 DCAF12L1Q5VU92 463 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 ARL6IP4Q66PJ3 421 aaKnown RBP6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 ZNF761Q86XN6 746 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 ADGRG2Q8IZP9 1017 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 TRIM63Q969Q1 353 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 MUL1Q969V5 352 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 SPSB4Q96A44 273 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 NELL2Q99435 816 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 MAGEB5Q9BZ81 275 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 XPNPEP3Q9NQH7 507 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 FBXO34Q9NWN3 711 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 DACT1Q9NYF0 836 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 ZNF212Q9UDV6 495 aa6.46□□□□□ -1.38
HMGB1P47-201ENST00000511281 UBE2QL1A1L167 161 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 FAM234BA2RU67 622 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 ZNF785A8K8V0 405 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 CCP110O43303 1012 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 KRT1P04264 644 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 CYP2C9P11712 490 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 XRCC6P12956 609 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 PRKG1Q13976 671 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 UBXN2BQ14CS0 331 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 CRB2Q5IJ48 1285 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 DRICH1Q6PGQ1 229 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 PCGF5Q86SE9 256 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 USP37Q86T82 979 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 GAS2L3Q86XJ1 694 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 YAF2Q8IY57 180 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 GLIS1Q8NBF1 620 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 SHCBP1Q8NEM2 672 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 STT3BQ8TCJ2 826 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 TCF25Q9BQ70 676 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 TERF2IPQ9NYB0 399 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 RGL1Q9NZL6 768 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 SLC45A2Q9UMX9 530 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 CLCA2Q9UQC9 943 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 TMX2Q9Y320 296 aa6.45□□□□□ -1.38
HMGB1P47-201ENST00000511281 MROH6A6NGR9 719 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 PODXLO00592 558 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 NCAM2O15394 837 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 BTF3P20290 206 aaKnown RBP6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 ZNF135P52742 658 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 ITGA8P53708 1063 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 EFR3AQ14156 821 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 AMOTQ4VCS5 1084 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 UTP14CQ5TAP6 766 aaKnown RBP6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 FAM160B1Q5W0V3 765 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 ANKS6Q68DC2 871 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 KIAA0408Q6ZU52 694 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 UBE3BQ7Z3V4 1068 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 KBTBD2Q8IY47 623 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 GPR135Q8IZ08 494 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms