RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 CEP63Q96MT8 703 aa5.83□□□□□ -1.48
PROM1-211ENST00000511153 LPIN3Q9BQK8 851 aa5.83□□□□□ -1.48
PROM1-211ENST00000511153 GPR62Q9BZJ7 368 aa5.83□□□□□ -1.48
PROM1-211ENST00000511153 NAT10Q9H0A0 1025 aaKnown RBP5.83□□□□□ -1.48
PROM1-211ENST00000511153 HSD3B7Q9H2F3 369 aa5.83□□□□□ -1.48
PROM1-211ENST00000511153 ELAC1Q9H777 363 aaKnown RBP5.83□□□□□ -1.48
PROM1-211ENST00000511153 SLC28A3Q9HAS3 691 aa5.83□□□□□ -1.48
PROM1-211ENST00000511153 PRM3Q9NNZ6 103 aa5.83□□□□□ -1.48
PROM1-211ENST00000511153 INTS13Q9NVM9 706 aa5.83□□□□□ -1.48
PROM1-211ENST00000511153 MARCH5Q9NX47 278 aa5.83□□□□□ -1.48
PROM1-211ENST00000511153 SIX4Q9UIU6 781 aa5.83□□□□□ -1.48
PROM1-211ENST00000511153 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.83□□□□□ -1.48
PROM1-211ENST00000511153 PER2O15055 1255 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 TEX33O43247 280 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 AP5Z1O43299 807 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 FGF18O76093 207 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 IL18RAPO95256 599 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 SERPINC1P01008 464 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 HLA-DRAP01903 254 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 ALDH2P05091 517 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 OR4Q2P0C623 313 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 PNMA6AP0CW24 399 aaPredicted RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 KCNE1P15382 129 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 CD58P19256 250 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 IGFBP4P22692 258 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 ACAT1P24752 427 aaKnown RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 BMP8BP34820 402 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 IRS1P35568 1242 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 ALDH7A1P49419 539 aaKnown RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 CDH8P55286 799 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 ZNF445P59923 1031 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 HTRA4P83105 476 aaPredicted RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 RBM10P98175 930 aaKnown RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 MYL7Q01449 175 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 GOLGA8FQ08AF8 430 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 GOLGA8DPQ0D2H9 430 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 TRPC3Q13507 836 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 NCOA4Q13772 614 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 HSP90AA2PQ14568 343 aaPredicted RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 NAB2Q15742 525 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 CCDC85BQ15834 202 aaPredicted RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 DUOXA2Q1HG44 320 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 EPC2Q52LR7 807 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 TIGD5Q53EQ6 642 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 TCP11X2Q5H9J9 407 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 C9orf57Q5W0N0 161 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 PRSS55Q6UWB4 352 aaPredicted RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 CD300LGQ6UXG3 332 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 EP400NLQ6ZTU2 488 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 SV2AQ7L0J3 742 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 RRAGAQ7L523 313 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 DPH6Q7L8W6 267 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 TRAPPC11Q7Z392 1133 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 FILIP1Q7Z7B0 1213 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 RBM23Q86U06 439 aaKnown RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 SLC9A9Q8IVB4 645 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 ZC3H3Q8IXZ2 948 aaKnown RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 CMTR2Q8IYT2 770 aaKnown RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 MICAL1Q8TDZ2 1067 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 KAT5Q92993 513 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 ZNF558Q96NG5 402 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 MMS19Q96T76 1030 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 TUBGCP2Q9BSJ2 902 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 LSM14BQ9BX40 385 aaKnown RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 VN1R3Q9BXE9 311 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 TTYH1Q9H313 450 aaPredicted RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 THAP9Q9H5L6 903 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 SMYD3Q9H7B4 428 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 RC3H2Q9HBD1 1191 aaKnown RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 APOBEC3GQ9HC16 384 aaKnown RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 KIAA1586Q9HCI6 787 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 UBN1Q9NPG3 1134 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 AJAP1Q9UKB5 411 aaPredicted RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 UBQLN1Q9UMX0 589 aaKnown RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 NUB1Q9Y5A7 615 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 PCDHA11Q9Y5I1 949 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 SNX9Q9Y5X1 595 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 REV3LO60673 3130 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 VWA8A3KMH1 1905 aa5.82□□□□□ -1.48
PROM1-211ENST00000511153 COL4A4P53420 1690 aaPredicted RBP5.82□□□□□ -1.48
PROM1-211ENST00000511153 SMTNL1A8MU46 457 aa5.81□□□□□ -1.48
PROM1-211ENST00000511153 SLC16A3O15427 465 aaKnown RBP5.81□□□□□ -1.48
PROM1-211ENST00000511153 ZBTB24O43167 697 aaPredicted RBP5.81□□□□□ -1.48
PROM1-211ENST00000511153 FGFR1OPO95684 399 aaKnown RBP5.81□□□□□ -1.48
PROM1-211ENST00000511153 C4BPAP04003 597 aaKnown RBP5.81□□□□□ -1.48
PROM1-211ENST00000511153 PDGFRBP09619 1106 aa5.81□□□□□ -1.48
PROM1-211ENST00000511153 WEE2P0C1S8 567 aa5.81□□□□□ -1.48
PROM1-211ENST00000511153 LINC00271P0C7V0 271 aa5.81□□□□□ -1.48
PROM1-211ENST00000511153 SPATA31D3P0C874 917 aa5.81□□□□□ -1.48
PROM1-211ENST00000511153 LAG3P18627 525 aa5.81□□□□□ -1.48
PROM1-211ENST00000511153 SLC9A1P19634 815 aa5.81□□□□□ -1.48
PROM1-211ENST00000511153 SCP2P22307 547 aa5.81□□□□□ -1.48
PROM1-211ENST00000511153 TKTP29401 623 aaKnown RBP5.81□□□□□ -1.48
PROM1-211ENST00000511153 GTF2F1P35269 517 aaKnown RBP eCLIP5.81□□□□□ -1.48
PROM1-211ENST00000511153 PPP1R2P41236 205 aa5.81□□□□□ -1.48
PROM1-211ENST00000511153 FMO5P49326 533 aa5.81□□□□□ -1.48
PROM1-211ENST00000511153 MXI1P50539 228 aa5.81□□□□□ -1.48
PROM1-211ENST00000511153 COPB1P53618 953 aaKnown RBP5.81□□□□□ -1.48
PROM1-211ENST00000511153 ERVFC1P60507 584 aa5.81□□□□□ -1.48
PROM1-211ENST00000511153 FANCCQ00597 558 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms