RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 CHRNB3Q05901 458 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 C1DQ13901 141 aaKnown RBP8.74□□□□□ -1.01
HTT-208ENST00000510626 RBBP7Q16576 425 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 RP1P56715 2156 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 STK4Q13043 487 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 SHQ1Q6PI26 577 aaKnown RBP8.74□□□□□ -1.01
HTT-208ENST00000510626 SIRT2Q8IXJ6 389 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 FBXO40Q9UH90 709 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 PCDHB2Q9Y5E7 798 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 CLIC2O15247 247 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 SNAP91O60641 907 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 PHKA2P46019 1235 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 FOXR2Q6PJQ5 311 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 TMEM179Q6ZVK1 233 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 CPDO75976 1380 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 MREGQ8N565 214 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 OSBP2Q969R2 916 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 FAM162AQ96A26 154 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 AGBL1Q96MI9 1066 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 MATN2O00339 956 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 BBOX1O75936 387 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 KCNK10P57789 538 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 PTK7Q13308 1070 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 IFT43Q96FT9 208 aa8.74□□□□□ -1.01
HTT-208ENST00000510626 E5RI56 91 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 H0YIN7 160 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 PHKA1P46020 1223 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 NR1H2P55055 460 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 B3GNT6Q6ZMB0 384 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 TMEM253P0C7T8 217 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 C3orf62Q6ZUJ4 267 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 RAPGEF5Q92565 580 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 ZIM3Q96PE6 472 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 KLHL25Q9H0H3 589 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 LRRC6Q86X45 466 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 HSPH1Q92598 858 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 STRBPQ96SI9 672 aaKnown RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 BTBD10Q9BSF8 475 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 C5orf58C9J3I9 102 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 DNAJB2P25686 324 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 CACNA2D1P54289 1103 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 ADARP55265 1226 aaKnown RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 RTL3Q8N8U3 475 aaKnown RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 TMIEQ8NEW7 156 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 CSADQ9Y600 493 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 TOP3AQ13472 1001 aaPredicted RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 ANGPTL8Q6UXH0 198 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 UNC5CLQ8IV45 518 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 CPXCR1Q8N123 301 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 NOA1Q8NC60 698 aaKnown RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 STK32AQ8WU08 396 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 RBM12Q9NTZ6 932 aaKnown RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 SHOC2Q9UQ13 582 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 ANKRD6Q9Y2G4 727 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 ATP6V1G2O95670 118 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 ALAS1P13196 640 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 SLC34A1Q06495 639 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 OR6B2Q6IFH4 312 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 KCNV1Q6PIU1 500 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 KCNA2P16389 499 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 RRM2P31350 389 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 TALDO1P37837 337 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 PPIDQ08752 370 aaKnown RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 LBRQ14739 615 aaKnown RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 PAGR1Q9BTK6 254 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 PNPLA7Q6ZV29 1317 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 VCPP55072 806 aaKnown RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 COPZ1P61923 177 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 BOLA3Q53S33 107 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 SPANXN2Q5MJ10 180 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 FBXL16Q8N461 479 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 HINFPQ9BQA5 517 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 P3H2Q8IVL5 708 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 CCDC33Q8N5R6 958 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 BLOC1S5Q8TDH9 187 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 PLEKHA8Q96JA3 519 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 C17orf75Q9HAS0 396 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 COILP38432 576 aaPredicted RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 ACADSBP45954 432 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 EIF2B2P49770 351 aaKnown RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 EIF3EP60228 445 aaKnown RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 PLOD1Q02809 727 aaPredicted RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 RWDD4Q6NW29 188 aaKnown RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 C9orf16Q9BUW7 83 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 EFCAB1Q9HAE3 211 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 RNPEPL1Q9HAU8 725 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 GDAQ9Y2T3 454 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 UCHL3P15374 230 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 ATN1P54259 1190 aaPredicted RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 ARHGEF6Q15052 776 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 MTFR1Q15390 333 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 EAPPQ56P03 285 aaPredicted RBP8.73□□□□□ -1.01
HTT-208ENST00000510626 SLC30A5Q8TAD4 765 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 SKA1Q96BD8 255 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 ZBTB10Q96DT7 871 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 FEM1BQ9UK73 627 aa8.73□□□□□ -1.01
HTT-208ENST00000510626 PRAMEP78395 509 aa8.72□□□□□ -1.01
HTT-208ENST00000510626 DUOXA2Q1HG44 320 aa8.72□□□□□ -1.01
HTT-208ENST00000510626 UNC45BQ8IWX7 931 aa8.72□□□□□ -1.01
HTT-208ENST00000510626 C19orf18Q8NEA5 215 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms