RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 ELMSAN1Q6PJG2 1045 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 TRAPPC11Q7Z392 1133 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 TCEAL8Q8IYN2 117 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 SMYD4Q8IYR2 804 aaPredicted RBP12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 NOC3LQ8WTT2 800 aaKnown RBP12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 CCDC127Q96BQ5 260 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 CGRRF1Q99675 332 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 WDR6Q9NNW5 1121 aaKnown RBP12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 RMND1Q9NWS8 449 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 AFF4Q9UHB7 1163 aaKnown RBP12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 DSEQ9UL01 958 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 USTQ9Y2C2 406 aa12.67□□□□□ -0.38
HMGXB3-203ENST00000510472 MAPK13O15264 365 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 CALUO43852 315 aaPredicted RBP12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 KINO60870 393 aaKnown RBP12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 SMC2O95347 1197 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 C4BPAP04003 597 aaKnown RBP12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 C8AP07357 584 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 TMEM191BP0C7N4 346 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 ODC1P11926 461 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 BMP6P22004 513 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 GPR17Q13304 367 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 EDRF1Q3B7T1 1238 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 SV2CQ496J9 727 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 C1orf220Q5T0J3 134 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 OVOS1Q6IE37 1185 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 CENPPQ6IPU0 288 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 OR10T2Q8NGX3 314 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 SLC7A14Q8TBB6 771 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 TMC2Q8TDI7 906 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 SMG7Q92540 1137 aaKnown RBP12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 SMARCE1Q969G3 411 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 ANKRD36BP1Q96IX9 119 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 RPGRIP1Q96KN7 1286 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 IPO9Q96P70 1041 aaKnown RBP12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 GTPBP4Q9BZE4 634 aaKnown RBP12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 HOOK1Q9UJC3 728 aaKnown RBP12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 MAN1B1Q9UKM7 699 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 BDP1A6H8Y1 2624 aa12.66□□□□□ -0.38
HMGXB3-203ENST00000510472 PI4K2BG5E9Z4 385 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 GABRDO14764 452 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 N4BP1O75113 896 aaKnown RBP12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 AKAP3O75969 853 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 STAU1O95793 577 aaKnown RBP12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 TNNC2P02585 160 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 DLATP10515 647 aaKnown RBP12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 TNNI1P19237 187 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 SSTR3P32745 418 aaPredicted RBP12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 PMS1P54277 932 aaKnown RBP12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 ENPEPQ07075 957 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 SOWAHAQ2M3V2 549 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 PPM1LQ5SGD2 360 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 LIN9Q5TKA1 542 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 RNF19BQ6ZMZ0 732 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 CCDC149Q6ZUS6 474 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 DPH6Q7L8W6 267 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 USP37Q86T82 979 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 LRRTM3Q86VH5 581 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 RNF135Q8IUD6 432 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 ZC3H3Q8IXZ2 948 aaKnown RBP12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 ADSSL1Q8N142 457 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 PDCL2Q8N4E4 241 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 ZNF560Q96MR9 790 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 FNBP1Q96RU3 617 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 TMEM209Q96SK2 561 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 XYLT2Q9H1B5 865 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 L1RE1Q9UN81 338 aa12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 PDCD11Q14690 1871 aaKnown RBP12.65□□□□□ -0.38
HMGXB3-203ENST00000510472 LRRIQ3A6PVS8 624 aaPredicted RBP12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 C2CD4DB7Z1M9 353 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 IKBKBO14920 756 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 FAM163BP0C2L3 166 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 OR4Q2P0C623 313 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 NR2F2P24468 414 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 RPL13P26373 211 aaKnown RBP12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 AP3M2P53677 418 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 ARPP19P56211 112 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 DLG4P78352 724 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 ADCY1Q08828 1119 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 ADAM9Q13443 819 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 MORC3Q14149 939 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 ZDHHC14Q8IZN3 488 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 TOP6BLQ8N6T0 577 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 SPATA18Q8TC71 538 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 HPDLQ96IR7 371 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 ZCWPW1Q9H0M4 648 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 CRISPLD1Q9H336 500 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 EPHX3Q9H6B9 360 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 VRTNQ9H8Y1 702 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 DNMT3BQ9UBC3 853 aaKnown RBP12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 HSFX1Q9UBD0 423 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 FRMD4BQ9Y2L6 1034 aa12.64□□□□□ -0.39
HMGXB3-203ENST00000510472 SPDYE4A6NLX3 237 aa12.63□□□□□ -0.39
HMGXB3-203ENST00000510472 PPP1R3GB7ZBB8 358 aa12.63□□□□□ -0.39
HMGXB3-203ENST00000510472 CCL16O15467 120 aa12.63□□□□□ -0.39
HMGXB3-203ENST00000510472 VNN1O95497 513 aa12.63□□□□□ -0.39
HMGXB3-203ENST00000510472 KRT19P08727 400 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms