RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 TMEM88BA6NKF7 163 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 MEFVO15553 781 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 SART1O43290 800 aaKnown RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 RAD51CO43502 376 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 PSTPIP1O43586 416 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 XPOTO43592 962 aaKnown RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 CILPO75339 1184 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 ZMYND10O75800 440 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 CALCAP01258 141 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 GLI1P08151 1106 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 CD19P15391 556 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 ATF7P17544 494 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 BRD2P25440 801 aaKnown RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 POLR2BP30876 1174 aaKnown RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 HOXA11P31270 313 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 CHRNA3P32297 505 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 GBP1P32455 592 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 PLA2G4AP47712 749 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 GJA9P57773 515 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 RNASE9P60153 205 aaKnown RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 FAM193AP78312 1265 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 CBX1P83916 185 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 PURAQ00577 322 aaKnown RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 GUCY2DQ02846 1103 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 PTPN11Q06124 597 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 GABPB1Q06547 395 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 INCA1Q0VD86 236 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 MAMLD1Q13495 774 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 DHX34Q14147 1143 aaKnown RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 SNX17Q15036 470 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 STILQ15468 1287 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 HSP90B2PQ58FF3 399 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 DNAJC24Q6P3W2 148 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 RUFY4Q6ZNE9 571 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 RSPH3Q86UC2 560 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 PASD1Q8IV76 773 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 LRRC52Q8N7C0 313 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 BEST2Q8NFU1 509 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 CXorf38Q8TB03 319 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 WHAMMQ8TF30 809 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 HDAC7Q8WUI4 952 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 LENG1Q96BZ8 264 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 KIF12Q96FN5 646 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 HPDLQ96IR7 371 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 OSMRQ99650 979 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 UBXN6Q9BZV1 441 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 TRIM6Q9C030 488 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 DNAI2Q9GZS0 605 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 MIS12Q9H081 205 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 RAB17Q9H0T7 212 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 UPF3AQ9H1J1 476 aaKnown RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 MED4Q9NPJ6 270 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 CNTN3Q9P232 1028 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 IP6K2Q9UHH9 426 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 RASAL2Q9UJF2 1139 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 POLIQ9UNA4 740 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 AGAP1Q9UPQ3 857 aa8.35□□□□□ -1.07
SSBP2-213ENST00000509743 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-213ENST00000509743 BHMG1C9JSJ3 638 aaPredicted RBP8.34□□□□□ -1.07
SSBP2-213ENST00000509743 M0QZ92 97 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 TLR3O15455 904 aaKnown RBP8.34□□□□□ -1.07
SSBP2-213ENST00000509743 PHF2O75151 1096 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 CAPN15O75808 1086 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 CD4P01730 458 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 HMGCRP04035 888 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 MYBL2P10244 700 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 VDRP11473 427 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 FGFR4P22455 802 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 CETN2P41208 172 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 PNPLA4P41247 253 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 PSMC4P43686 418 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 MARCKSL1P49006 195 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 AARSP49588 968 aaKnown RBP eCLIP8.34□□□□□ -1.07
SSBP2-213ENST00000509743 RAD23BP54727 409 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 GSCP56915 257 aaPredicted RBP8.34□□□□□ -1.07
SSBP2-213ENST00000509743 BEX3Q00994 111 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 SLC7A5Q01650 507 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 DR1Q01658 176 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 TMEM62Q0P6H9 643 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 NOGQ13253 232 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 ZNF211Q13398 564 aaPredicted RBP8.34□□□□□ -1.07
SSBP2-213ENST00000509743 SMC1AQ14683 1233 aaKnown RBP8.34□□□□□ -1.07
SSBP2-213ENST00000509743 ERICH1Q86X53 443 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 RHOT1Q8IXI2 618 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 C3orf20Q8ND61 904 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 C1orf131Q8NDD1 294 aaKnown RBP8.34□□□□□ -1.07
SSBP2-213ENST00000509743 FEZF2Q8TBJ5 459 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 DNAJB3Q8WWF6 145 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 KRT35Q92764 455 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 TMEM176AQ96HP8 235 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 AP1M1Q9BXS5 423 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 DDX47Q9H0S4 455 aaKnown RBP8.34□□□□□ -1.07
SSBP2-213ENST00000509743 SMYD3Q9H7B4 428 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 EPB41L5Q9HCM4 733 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 FAM114A2Q9NRY5 505 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 WDR35Q9P2L0 1181 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 CHORDC1Q9UHD1 332 aaPredicted RBP8.34□□□□□ -1.07
SSBP2-213ENST00000509743 HPCAL4Q9UM19 191 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 BARX2Q9UMQ3 279 aaPredicted RBP8.34□□□□□ -1.07
SSBP2-213ENST00000509743 UBQLN1Q9UMX0 589 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms