RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 VPS16Q9H269 839 aa5.34□□□□□ -1.55
CCDC30-213ENST00000509712 C12orf10Q9HB07 376 aa5.34□□□□□ -1.55
CCDC30-213ENST00000509712 ZCCHC17Q9NP64 241 aaKnown RBP5.34□□□□□ -1.55
CCDC30-213ENST00000509712 CRTAC1Q9NQ79 661 aa5.34□□□□□ -1.55
CCDC30-213ENST00000509712 ANO10Q9NW15 660 aa5.34□□□□□ -1.55
CCDC30-213ENST00000509712 PIH1D1Q9NWS0 290 aaKnown RBP5.34□□□□□ -1.55
CCDC30-213ENST00000509712 CRNNQ9UBG3 495 aaPredicted RBP5.34□□□□□ -1.55
CCDC30-213ENST00000509712 MTRF1LQ9UGC7 380 aaKnown RBP5.34□□□□□ -1.55
CCDC30-213ENST00000509712 ZMYND8Q9ULU4 1186 aaPredicted RBP5.34□□□□□ -1.55
CCDC30-213ENST00000509712 MAPRE3Q9UPY8 281 aa5.34□□□□□ -1.55
CCDC30-213ENST00000509712 C15orf41Q9Y2V0 281 aa5.34□□□□□ -1.55
CCDC30-213ENST00000509712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.34□□□□□ -1.56
CCDC30-213ENST00000509712 FRMD3A2A2Y4 597 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 SRRM3A6NNA2 597 aaPredicted RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 C22orf46C9J442 243 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 RASA4BC9J798 803 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 STRNO43815 780 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 USO1O60763 962 aaKnown RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 GLRX3O76003 335 aaKnown RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 APOEP02649 317 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 RAC2P15153 192 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 PRLRP16471 622 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 PTPN2P17706 415 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 IL32P24001 234 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 TACR1P25103 407 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 HPDP32754 393 aaPredicted RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 LIFRP42702 1097 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 MECP2P51608 486 aaKnown RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 THOP1P52888 689 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 UBXN1Q04323 297 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 RELQ04864 619 aaPredicted RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 NIPAL4Q0D2K0 466 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 FZD5Q13467 585 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 CRY1Q16526 586 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 SHROOM1Q2M3G4 852 aaPredicted RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 ERCC6LQ2NKX8 1250 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 PDCD4Q53EL6 469 aaKnown RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 WDR45BQ5MNZ6 344 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 ZBTB41Q5SVQ8 909 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 FKBP15Q5T1M5 1219 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 ABRAXAS1Q6UWZ7 409 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 ATG4DQ86TL0 474 aaPredicted RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 LZTR1Q8N653 840 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 ZNF713Q8N859 430 aaPredicted RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 CNNM3Q8NE01 707 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 MDM1Q8TC05 714 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 CASP10Q92851 521 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 SLC39A13Q96H72 371 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 TMEM169Q96HH4 297 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 MED30Q96HR3 178 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 NDNQ99608 321 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 AIFM2Q9BRQ8 373 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 CCDC28BQ9BUN5 200 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 NAA15Q9BXJ9 866 aaKnown RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 RNF32Q9H0A6 362 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 SH3GLB2Q9NR46 395 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 CLDND1Q9NY35 253 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 GPR160Q9UJ42 338 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 KIAA1257Q9ULG3 409 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 CBLCQ9ULV8 474 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 PA2G4Q9UQ80 394 aaKnown RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 COQ6Q9Y2Z9 468 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 SNX5Q9Y5X3 404 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 TTC41PQ6P2S7 1318 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 B4E1Z4 1266 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 FAM47E-STBD1D6RA91 191 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 PSMD14O00487 310 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 PLSCR1O15162 318 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 KMOO15229 486 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 BUB1BO60566 1050 aaPredicted RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 KLHL41O60662 606 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 DAB1O75553 588 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 FUCA1P04066 466 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 JMJD7P0C870 316 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 SCG2P13521 617 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 NCAM1P13591 858 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 PNLIPP16233 465 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 TMOD1P28289 359 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 IRAK1P51617 712 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 CCNG1P51959 295 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 HSD17B7P56937 341 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 OLR1P78380 273 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 GPSM2P81274 684 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 MXRA7P84157 204 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 TCIRG1Q13488 830 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 SEMA3AQ14563 771 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 KIF22Q14807 665 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 PCBP1Q15365 356 aaKnown RBP eCLIP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 ADRM1Q16186 407 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 IMMTQ16891 758 aaKnown RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 CAVIN4Q5BKX8 364 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 DEPDC1Q5TB30 811 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 PKN3Q6P5Z2 889 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 USP51Q70EK9 711 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 OVCH1Q7RTY7 1134 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 EXOC3L1Q86VI1 746 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 ANKLE2Q86XL3 938 aa5.33□□□□□ -1.56
CCDC30-213ENST00000509712 DDX42Q86XP3 938 aaKnown RBP eCLIP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 ZC3H7AQ8IWR0 971 aaKnown RBP5.33□□□□□ -1.56
CCDC30-213ENST00000509712 SCYL3Q8IZE3 742 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms