RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 RCOR1Q9UKL0 485 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 GOLGA8IPA6NC78 632 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 GOLGA8JA6NMD2 632 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 GALR2O43603 387 aaPredicted RBP19.4■□□□□ 0.7
TPM3-220ENST00000509601 MOSPD3O75425 235 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 IL18RAPO95256 599 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 LDHAP00338 332 aaKnown RBP19.4■□□□□ 0.7
TPM3-220ENST00000509601 CEBPBP17676 345 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 AOC1P19801 751 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 TWF1Q12792 350 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 DUSP4Q13115 394 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 MYBPC2Q14324 1141 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 ATL3Q6DD88 541 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 CENPPQ6IPU0 288 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 BRSK2Q8IWQ3 736 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 KCNG4Q8TDN1 519 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 ZNF512Q96ME7 567 aaPredicted RBP19.4■□□□□ 0.7
TPM3-220ENST00000509601 PGLYRP2Q96PD5 576 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 C7orf25Q9BPX7 421 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 RTP3Q9BQQ7 232 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 PLA2G2FQ9BZM2 168 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 PCIF1Q9H4Z3 704 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 GDE1Q9NZC3 331 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 CA14Q9ULX7 337 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 MYO15AQ9UKN7 3530 aa19.4■□□□□ 0.7
TPM3-220ENST00000509601 CYB561D2O14569 222 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 POLR2DO15514 142 aaKnown RBP19.39■□□□□ 0.69
TPM3-220ENST00000509601 EXTL3O43909 919 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 MICAL2O94851 1124 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 ODC1P11926 461 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 AMPD3Q01432 767 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 DNM1Q05193 864 aaKnown RBP19.39■□□□□ 0.69
TPM3-220ENST00000509601 RESP18Q5W5W9 173 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 MTSS1LQ765P7 747 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 EPM2AIP1Q7L775 607 aaPredicted RBP19.39■□□□□ 0.69
TPM3-220ENST00000509601 ATAD1Q8NBU5 361 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 OR10T2Q8NGX3 314 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 CXorf38Q8TB03 319 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 ZNF507Q8TCN5 953 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 LRRC3Q9BY71 257 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 SLC27A5Q9Y2P5 690 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 ZDHHC9Q9Y397 364 aa19.39■□□□□ 0.69
TPM3-220ENST00000509601 H0Y858 1186 aa19.38■□□□□ 0.69
TPM3-220ENST00000509601 CASP1P29466 404 aa19.38■□□□□ 0.69
TPM3-220ENST00000509601 TAF6P49848 677 aa19.38■□□□□ 0.69
TPM3-220ENST00000509601 EPHA5P54756 1037 aa19.38■□□□□ 0.69
TPM3-220ENST00000509601 EHHADHQ08426 723 aa19.38■□□□□ 0.69
TPM3-220ENST00000509601 TANGO2Q6ICL3 276 aa19.38■□□□□ 0.69
TPM3-220ENST00000509601 FAM84AQ96KN4 292 aa19.38■□□□□ 0.69
TPM3-220ENST00000509601 KXD1Q9BQD3 176 aa19.38■□□□□ 0.69
TPM3-220ENST00000509601 DNAJC25Q9H1X3 360 aa19.38■□□□□ 0.69
TPM3-220ENST00000509601 CFAP45Q9UL16 551 aa19.38■□□□□ 0.69
TPM3-220ENST00000509601 YIPF1Q9Y548 306 aa19.38■□□□□ 0.69
TPM3-220ENST00000509601 USP34Q70CQ2 3546 aa19.38■□□□□ 0.69
TPM3-220ENST00000509601 MTMR11A4FU01 709 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 KPNA7A9QM74 516 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 ZNF197O14709 1029 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 ECI2O75521 394 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 ME1P48163 572 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 MRE11P49959 708 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 ASIC1P78348 528 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 CYP4A22Q5TCH4 519 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 WSCD1Q658N2 575 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 IQCEQ6IPM2 695 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 LRRTM3Q86VH5 581 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 C1orf127Q8N9H9 656 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 ZSWIM3Q96MP5 696 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 PYM1Q9BRP8 204 aaKnown RBP19.37■□□□□ 0.69
TPM3-220ENST00000509601 ZCWPW1Q9H0M4 648 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 PDE11AQ9HCR9 933 aa19.37■□□□□ 0.69
TPM3-220ENST00000509601 RBAKQ9NYW8 714 aaPredicted RBP19.37■□□□□ 0.69
TPM3-220ENST00000509601 GJA1P17302 382 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 FCARP24071 287 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 TFAMQ00059 246 aaKnown RBP19.36■□□□□ 0.69
TPM3-220ENST00000509601 FAM78AQ5JUQ0 283 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 PHLDB3Q6NSJ2 640 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 ARMCX5Q6P1M9 558 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 UNC13DQ70J99 1090 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 PDZD4Q76G19 769 aaPredicted RBP19.36■□□□□ 0.69
TPM3-220ENST00000509601 GPD1LQ8N335 351 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 ELMOD1Q8N336 334 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 CACTINQ8WUQ7 758 aaKnown RBP19.36■□□□□ 0.69
TPM3-220ENST00000509601 CHAMP1Q96JM3 812 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 BLZF1Q9H2G9 400 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 TBC1D17Q9HA65 648 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 ARHGEF3Q9NR81 526 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 FAM86C1Q9NVL1 165 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 DSEQ9UL01 958 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 AGAP1Q9UPQ3 857 aa19.36■□□□□ 0.69
TPM3-220ENST00000509601 STK25O00506 426 aa19.35■□□□□ 0.69
TPM3-220ENST00000509601 KIAA0391O15091 583 aaKnown RBP19.35■□□□□ 0.69
TPM3-220ENST00000509601 TGFB1I1O43294 461 aa19.35■□□□□ 0.69
TPM3-220ENST00000509601 MYL4P12829 197 aa19.35■□□□□ 0.69
TPM3-220ENST00000509601 STARD6P59095 220 aa19.35■□□□□ 0.69
TPM3-220ENST00000509601 SLC44A4Q53GD3 710 aa19.35■□□□□ 0.69
TPM3-220ENST00000509601 TMC8Q8IU68 726 aa19.35■□□□□ 0.69
TPM3-220ENST00000509601 CSGALNACT2Q8N6G5 542 aa19.35■□□□□ 0.69
TPM3-220ENST00000509601 TTC9BQ8N6N2 239 aa19.35■□□□□ 0.69
TPM3-220ENST00000509601 LEMD2Q8NC56 503 aa19.35■□□□□ 0.69
TPM3-220ENST00000509601 SCFD1Q8WVM8 642 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms