RNA–Protein interactions for RNA: ENST00000509411.5

FBXO38-215, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-215	ENST00000509411	RNF208	Q9H0X6	261 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	VRTN	Q9H8Y1	702 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	PLEKHA5	Q9HAU0	1116 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	MIOS	Q9NXC5	875 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	STXBP5L	Q9Y2K9	1186 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411	PCDHGC5	Q9Y5F6	944 aa		10.81	□□□□□ -0.68
FBXO38-215	ENST00000509411		A0A0A6YYK5	440 aa	Predicted RBP	10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	SMIM28	A0A1B0GU29	152 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	ANKRD62	A6NC57	917 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	MOXD2P	A6NHM9	499 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	SPTLC1	O15269	473 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	CLSTN1	O94985	981 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	GZMA	P12544	262 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	CCL5	P13501	91 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	CAPN2	P17655	700 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	GNA15	P30679	374 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	RAD23B	P54727	409 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	NAP1L1	P55209	391 aa	Known RBP	10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	RBP5	P82980	135 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	PTPN11	Q06124	597 aa	Predicted RBP	10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	NCBP1	Q09161	790 aa	Known RBP	10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	PTP4A2	Q12974	167 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	C2CD6	Q53TS8	623 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	ZNF667	Q5HYK9	610 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	ACAD10	Q6JQN1	1059 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	SLFN11	Q7Z7L1	901 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	PHLDB2	Q86SQ0	1253 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	NT5DC4	Q86YG4	428 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	PASD1	Q8IV76	773 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	FMNL3	Q8IVF7	1028 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	CD302	Q8IX05	232 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	WDTC1	Q8N5D0	677 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	GSTCD	Q8NEC7	633 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	TRIM58	Q8NG06	486 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	COG1	Q8WTW3	980 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	TAF4B	Q92750	862 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	LPP	Q93052	612 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	HPDL	Q96IR7	371 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	TSEN34	Q9BSV6	310 aa	Known RBP	10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	EPC1	Q9H2F5	836 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	GOLGA2P5	Q9HBQ8	144 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	ABCB6	Q9NP58	842 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	SMARCAL1	Q9NZC9	954 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	EHD2	Q9NZN4	543 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	CACNG4	Q9UBN1	327 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	PARP2	Q9UGN5	583 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	PADI3	Q9ULW8	664 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	PHF24	Q9UPV7	400 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	DERA	Q9Y315	318 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	HYOU1	Q9Y4L1	999 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	PCDHB2	Q9Y5E7	798 aa		10.8	□□□□□ -0.68
FBXO38-215	ENST00000509411	ANO9	A1A5B4	782 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411		M0QZ92	97 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	PIR	O00625	290 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	THAP12	O43422	761 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	HCRT	O43612	131 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	TADA3	O75528	432 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	CABYR	O75952	493 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	STAU1	O95793	577 aa	Known RBP	10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	CYP1A2	P05177	515 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	KCNE1	P15382	129 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	ATF7	P17544	494 aa	Predicted RBP	10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	CYP3A5	P20815	502 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	ATIC	P31939	592 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	NOP2	P46087	812 aa	Known RBP	10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	NOMO3	P69849	1222 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	TCEAL1	Q15170	157 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	WDR72	Q3MJ13	1102 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	MEI1	Q5TIA1	1274 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	NAA35	Q5VZE5	725 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	C9orf57	Q5W0N0	161 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	TWF2	Q6IBS0	349 aa	Known RBP	10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	RSPH3	Q86UC2	560 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	RTN4RL1	Q86UN2	441 aa	Predicted RBP	10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	ZNF710	Q8N1W2	664 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	SLC4A11	Q8NBS3	891 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	ZNF606	Q8WXB4	792 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	CPA5	Q8WXQ8	436 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	RFFL	Q8WZ73	363 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	DPF3	Q92784	378 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	BTBD6	Q96KE9	485 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	ZFP42	Q96MM3	310 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	GLT1D1	Q96MS3	346 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	PSMB7	Q99436	277 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	MRPL45	Q9BRJ2	306 aa	Known RBP	10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	IMPG2	Q9BZV3	1241 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	TRIM6	Q9C030	488 aa	Predicted RBP	10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	LUC7L	Q9NQ29	371 aa	Known RBP	10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	FAM105A	Q9NUU6	356 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	PUF60	Q9UHX1	559 aa	Known RBP	10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	ITGA11	Q9UKX5	1188 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	SNX12	Q9UMY4	172 aa		10.79	□□□□□ -0.68
FBXO38-215	ENST00000509411	ARVCF	O00192	962 aa		10.78	□□□□□ -0.68
FBXO38-215	ENST00000509411	BUB1B	O60566	1050 aa	Predicted RBP	10.78	□□□□□ -0.68
FBXO38-215	ENST00000509411	CILP	O75339	1184 aa		10.78	□□□□□ -0.68
FBXO38-215	ENST00000509411	CKB	P12277	381 aa		10.78	□□□□□ -0.68
FBXO38-215	ENST00000509411	CXCR5	P32302	372 aa		10.78	□□□□□ -0.68
FBXO38-215	ENST00000509411	CDK7	P50613	346 aa		10.78	□□□□□ -0.68
FBXO38-215	ENST00000509411	YARS	P54577	528 aa	Known RBP	10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms