RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 MED15Q96RN5 788 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 TMEM209Q96SK2 561 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 CLSTN3Q9BQT9 956 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 TCHPQ9BT92 498 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 APOL5Q9BWW9 433 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 S1PR5Q9H228 398 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 CRISPLD1Q9H336 500 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 IGFLR1Q9H665 355 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 PDE11AQ9HCR9 933 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 DMAC2Q9NW81 257 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 KANSL3Q9P2N6 904 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 MAN1B1Q9UKM7 699 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 ATP6V1DQ9Y5K8 247 aa7.82□□□□□ -1.16
TOPBP1-207ENST00000509162 DOCK6Q96HP0 2047 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 SF3B1O75533 1304 aaKnown RBP eCLIP7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 TRIM49BA6NDI0 452 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 PIRO00625 290 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 EXTL3O43909 919 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 LRRN2O75325 713 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 MATR3P43243 847 aaKnown RBP eCLIP7.81□□□□□ -1.162e-6■■□□□ 13.1
TOPBP1-207ENST00000509162 CYP2J2P51589 502 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 DLG4P78352 724 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 PPP2R3AQ06190 1150 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 CYP24A1Q07973 514 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 NCBP1Q09161 790 aaKnown RBP7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 FOXC1Q12948 553 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 MRPL58Q14197 206 aaKnown RBP7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 KCNB1Q14721 858 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 PTPRNQ16849 979 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 FAM171A1Q5VUB5 890 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 C9orf57Q5W0N0 161 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 ZNF787Q6DD87 383 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 ANKRD54Q6NXT1 300 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 ARMCX5Q6P1M9 558 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 LILRA6Q6PI73 481 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 TMEM184AQ6ZMB5 413 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 TMC7Q7Z402 723 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 OSTM1Q86WC4 334 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 GLYCTKQ8IVS8 523 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 ZC3H3Q8IXZ2 948 aaKnown RBP7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 OR10T2Q8NGX3 314 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 FAM174AQ8TBP5 190 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 GPT2Q8TD30 523 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 STK32AQ8WU08 396 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 RIN2Q8WYP3 895 aaPredicted RBP7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 SUSD3Q96L08 255 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 OCSTAMPQ9BR26 566 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 MTMR12Q9C0I1 747 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 TLE6Q9H808 572 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 LMBRD1Q9NUN5 540 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 EXOC1Q9NV70 894 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 TOR4AQ9NXH8 423 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 RBAKQ9NYW8 714 aaPredicted RBP7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 MTRRQ9UBK8 725 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 USP25Q9UHP3 1055 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 FBXW11Q9UKB1 542 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 MAPK8IP1Q9UQF2 711 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 USP15Q9Y4E8 981 aaPredicted RBP7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 GPSM3Q9Y4H4 160 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 PCDHA5Q9Y5H7 936 aa7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 TIMM13Q9Y5L4 95 aaPredicted RBP7.81□□□□□ -1.16
TOPBP1-207ENST00000509162 DOCK8Q8NF50 2099 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 WDR27A2RRH5 827 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 LRRIQ3A6PVS8 624 aaPredicted RBP7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 M0QZQ0 153 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 TGM5O43548 720 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 N4BP1O75113 896 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 RFPL2O75678 378 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 B3GAT3O94766 335 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 CXCL14O95715 111 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 ALDH2P05091 517 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 URODP06132 367 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 OR4Q2P0C623 313 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 SPATA31D3P0C874 917 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 JUNDP17535 347 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 CYP3A5P20815 502 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 SCP2P22307 547 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 CDR1P51861 262 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 YARSP54577 528 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 ROR1Q01973 937 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 ZP2Q05996 745 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 SMAD4Q13485 552 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 TMEM132DQ14C87 1099 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 PSMD5Q16401 504 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 KNOP1Q1ED39 458 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 SPATA31D4Q6ZUB0 917 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 GPD1LQ8N335 351 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 TTC9BQ8N6N2 239 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 SLC17A8Q8NDX2 589 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 ATXN2LQ8WWM7 1075 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 TIGD1Q96MW7 591 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 UROC1Q96N76 676 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 FAM193BQ96PV7 902 aaPredicted RBP7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 POP1Q99575 1024 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 COLEC11Q9BWP8 271 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 TMEM206Q9H813 350 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 RPF1Q9H9Y2 349 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 PLEKHA5Q9HAU0 1116 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 NGRNQ9NPE2 291 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms