RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 UPP1Q16831 310 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 TDRD12Q587J7 1177 aaKnown RBP11.11□□□□□ -0.63
RFC1-211ENST00000509084 DCLRE1AQ6PJP8 1040 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 ZNF365Q70YC5 407 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 VPS36Q86VN1 386 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 COLGALT2Q8IYK4 626 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 FAM71AQ8IYT1 594 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 CCDC170Q8IYT3 715 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 TOP6BLQ8N6T0 577 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 PHOSPHO2Q8TCD6 241 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 HERVK_113Q902F9 699 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 KAT5Q92993 513 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 MMS19Q96T76 1030 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 GPR88Q9GZN0 384 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.11□□□□□ -0.63
RFC1-211ENST00000509084 DSEQ9UL01 958 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 CNTN6Q9UQ52 1028 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 SNX9Q9Y5X1 595 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 COL4A6Q14031 1691 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
RFC1-211ENST00000509084 PPEF2O14830 753 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 TRAPPC3O43617 180 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 HUS1O60921 280 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 TACC1O75410 805 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 B3GAT3O94766 335 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 UPP2O95045 317 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 IPO7O95373 1038 aaKnown RBP11.1□□□□□ -0.63
RFC1-211ENST00000509084 ODC1P11926 461 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 KRT5P13647 590 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 SYN1P17600 705 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 USP8P40818 1118 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 AARSP49588 968 aaKnown RBP eCLIP11.1□□□□□ -0.63
RFC1-211ENST00000509084 LILRA4P59901 499 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 CCZ1BP86790 482 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 CCZ1P86791 482 aaPredicted RBP11.1□□□□□ -0.63
RFC1-211ENST00000509084 PTK2Q05397 1052 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 GOLGA8FQ08AF8 430 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 GOLGA8DPQ0D2H9 430 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 INCA1Q0VD86 236 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 ELAVL2Q12926 359 aaKnown RBP11.1□□□□□ -0.63
RFC1-211ENST00000509084 TMEM240Q5SV17 173 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 DSTYKQ6XUX3 929 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 SCARA5Q6ZMJ2 495 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 OTOP2Q7RTS6 562 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 UNC93AQ86WB7 457 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 ZNF677Q86XU0 584 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 HS6ST3Q8IZP7 471 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 TMEM86AQ8N2M4 240 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 UBR7Q8N806 425 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 APPL2Q8NEU8 664 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 ARID3AQ99856 593 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 COLEC11Q9BWP8 271 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 DEF6Q9H4E7 631 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 CISHQ9NSE2 258 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 ZMYND8Q9ULU4 1186 aaPredicted RBP11.1□□□□□ -0.63
RFC1-211ENST00000509084 POLIQ9UNA4 740 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 PCDHB4Q9Y5E5 795 aa11.1□□□□□ -0.63
RFC1-211ENST00000509084 FOXN3O00409 490 aaPredicted RBP11.09□□□□□ -0.63
RFC1-211ENST00000509084 CYB561D2O14569 222 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 DDHD2O94830 711 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 SLC34A2O95436 690 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 ALDH2P05091 517 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 PAEPP09466 180 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 SKILP12757 684 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 LAG3P18627 525 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 ACO1P21399 889 aaKnown RBP11.09□□□□□ -0.63
RFC1-211ENST00000509084 OR1G1P47890 313 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 DEFB103AP81534 67 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 WDR59Q6PJI9 974 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 TMEM270Q6UE05 265 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 C16orf59Q7L2K0 433 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 IRF2BP2Q7Z5L9 587 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 METTL23Q86XA0 190 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 ZNF280BQ86YH2 543 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 TMEM139Q8IV31 216 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 RBBP8NLQ8NC74 664 aaPredicted RBP11.09□□□□□ -0.63
RFC1-211ENST00000509084 ZNF689Q96CS4 500 aaPredicted RBP11.09□□□□□ -0.63
RFC1-211ENST00000509084 CCDC42Q96M95 316 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 YME1L1Q96TA2 773 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.09□□□□□ -0.635e-11■■□□□ 13.1
RFC1-211ENST00000509084 SMYD3Q9H7B4 428 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 NRDE2Q9H7Z3 1164 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 RC3H2Q9HBD1 1191 aaKnown RBP11.09□□□□□ -0.63
RFC1-211ENST00000509084 BARX2Q9UMQ3 279 aaPredicted RBP11.09□□□□□ -0.63
RFC1-211ENST00000509084 FAN1Q9Y2M0 1017 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 SLC4A7Q9Y6M7 1214 aa11.09□□□□□ -0.63
RFC1-211ENST00000509084 M0QZQ0 153 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 CYP26A1O43174 497 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 AKR1B10O60218 316 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 CILPO75339 1184 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 KIF4AO95239 1232 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 GJB5O95377 273 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 CYP11A1P05108 521 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 WEE2P0C1S8 567 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 CD58P19256 250 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 WARSP23381 471 aaKnown RBP11.08□□□□□ -0.64
RFC1-211ENST00000509084 LHX1P48742 406 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 GATMP50440 423 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 ZNF132P52740 706 aa11.08□□□□□ -0.64
RFC1-211ENST00000509084 HTRA4P83105 476 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms