RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 SLC27A5Q9Y2P5 690 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 DMDP11532 3685 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 F5P12259 2224 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 FAM170BA6NMN3 283 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 CYP11A1P05108 521 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 MYL4P12829 197 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 GJA1P17302 382 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 CD72P21854 359 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 CCDC73Q6ZRK6 1079 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 ATAD1Q8NBU5 361 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 LEMD2Q8NC56 503 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 POMGNT1Q8WZA1 660 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 SMARCD2Q92925 531 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 HVCN1Q96D96 273 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 BORCS6Q96GS4 357 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 ASB16Q96NS5 453 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 TMEM209Q96SK2 561 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 NELL2Q99435 816 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 OSBPL6Q9BZF3 934 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 DNAJC25Q9H1X3 360 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 ZSCAN16Q9H4T2 348 aaPredicted RBP13.54□□□□□ -0.24
PDPN-208ENST00000509009 MRPL44Q9H9J2 332 aaKnown RBP13.54□□□□□ -0.24
PDPN-208ENST00000509009 DPP3Q9NY33 737 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 TBC1D7Q9P0N9 293 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 C2CD2Q9Y426 696 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 YIPF1Q9Y548 306 aa13.54□□□□□ -0.24
PDPN-208ENST00000509009 PDCD11Q14690 1871 aaKnown RBP13.53□□□□□ -0.24
PDPN-208ENST00000509009 A0A087X0B3 334 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 SHISA7A6NL88 538 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 STX6O43752 255 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 SP9P0CG40 484 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 ODC1P11926 461 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 TXLNAP40222 546 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 VIPR2P41587 438 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 ALDH1A3P47895 512 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 EPHB3P54753 998 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 UBXN2BQ14CS0 331 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 ARMCX5Q6P1M9 558 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 MAML2Q8IZL2 1156 aaPredicted RBP13.53□□□□□ -0.24
PDPN-208ENST00000509009 ZSWIM2Q8NEG5 633 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 SHKBP1Q8TBC3 707 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 ACCSQ96QU6 501 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 TRMT61BQ9BVS5 477 aaKnown RBP13.53□□□□□ -0.24
PDPN-208ENST00000509009 TRPV4Q9HBA0 871 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 ASAH2Q9NR71 780 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
PDPN-208ENST00000509009 MYH15Q9Y2K3 1946 aa13.52□□□□□ -0.24
PDPN-208ENST00000509009 MTMR11A4FU01 709 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 K7ELQ4 463 aaPredicted RBP13.52□□□□□ -0.25
PDPN-208ENST00000509009 CYB561D2O14569 222 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 IL18RAPO95256 599 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 IDEP14735 1019 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 STAT6P42226 847 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 NASPP49321 788 aaPredicted RBP13.52□□□□□ -0.25
PDPN-208ENST00000509009 CASP5P51878 434 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 PLD1Q13393 1074 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 FZD5Q13467 585 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 GRM2Q14416 872 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 TEAD2Q15562 447 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 L1TD1Q5T7N2 865 aaKnown RBP13.52□□□□□ -0.25
PDPN-208ENST00000509009 DNAJB7Q7Z6W7 309 aaPredicted RBP13.52□□□□□ -0.25
PDPN-208ENST00000509009 TMC8Q8IU68 726 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 EFCAB13Q8IY85 973 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 OR10T2Q8NGX3 314 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 ZSCAN18Q8TBC5 510 aaPredicted RBP13.52□□□□□ -0.25
PDPN-208ENST00000509009 CLDN23Q96B33 292 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 FAM213AQ9BRX8 229 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 BCO2Q9BYV7 579 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 GPR88Q9GZN0 384 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 ZCWPW1Q9H0M4 648 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 SEMA4AQ9H3S1 761 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 BRD9Q9H8M2 597 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 LTB4R2Q9NPC1 389 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 OLFML3Q9NRN5 406 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 HEBP1Q9NRV9 189 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 PANK4Q9NVE7 773 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 TFIP11Q9UBB9 837 aaKnown RBP13.52□□□□□ -0.25
PDPN-208ENST00000509009 HSFX1Q9UBD0 423 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 EXOC7Q9UPT5 735 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 ASB3Q9Y575 518 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 R4GN57 208 aa13.52□□□□□ -0.25
PDPN-208ENST00000509009 FRMD3A2A2Y4 597 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 SOAT2O75908 522 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 GCNT3O95395 438 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 PSMC3P17980 439 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 TAF6P49848 677 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 WNT7BP56706 349 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 WSCD1Q658N2 575 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 VITQ6UXI7 678 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 ZNF852Q6ZMS4 543 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 TPRG1Q6ZUI0 275 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 LRRTM3Q86VH5 581 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 METTL23Q86XA0 190 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 NT5DC4Q86YG4 428 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 MFSD6LQ8IWD5 586 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 ADSSL1Q8N142 457 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 TTC9BQ8N6N2 239 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 PDILTQ8N807 584 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 LINC00301Q8NCQ3 95 aa13.51□□□□□ -0.25
PDPN-208ENST00000509009 DNASE1L2Q92874 299 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms