RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 PCIF1Q9H4Z3 704 aa8.72□□□□□ -1.01
CCDC149-206ENST00000508236 ZNF287Q9HBT7 754 aa8.72□□□□□ -1.01
CCDC149-206ENST00000508236 NLRC4Q9NPP4 1024 aa8.72□□□□□ -1.01
CCDC149-206ENST00000508236 INTS13Q9NVM9 706 aa8.72□□□□□ -1.01
CCDC149-206ENST00000508236 RMND1Q9NWS8 449 aa8.72□□□□□ -1.01
CCDC149-206ENST00000508236 CLDND1Q9NY35 253 aa8.72□□□□□ -1.01
CCDC149-206ENST00000508236 GTF2IRD1Q9UHL9 959 aa8.72□□□□□ -1.01
CCDC149-206ENST00000508236 ZNF215Q9UL58 517 aaPredicted RBP8.72□□□□□ -1.01
CCDC149-206ENST00000508236 XDHP47989 1333 aa8.72□□□□□ -1.01
CCDC149-206ENST00000508236 SYNRGQ9UMZ2 1314 aa8.72□□□□□ -1.01
CCDC149-206ENST00000508236 FOCADQ5VW36 1801 aa8.71□□□□□ -1.01
CCDC149-206ENST00000508236 NMT2O60551 498 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 AMY2AP04746 511 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 BMP3P12645 472 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 AMY2BP19961 511 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 MAP4P27816 1152 aaKnown RBP8.71□□□□□ -1.02
CCDC149-206ENST00000508236 RFC4P35249 363 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 ACTN2P35609 894 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 PCBP3P57721 371 aaKnown RBP8.71□□□□□ -1.02
CCDC149-206ENST00000508236 CORO7P57737 925 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 TUBB4BP68371 445 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 SPAG1Q07617 926 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 TRAF1Q13077 416 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 LAPTM5Q13571 262 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 CCDC93Q567U6 631 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 ANGEL2Q5VTE6 544 aaKnown RBP8.71□□□□□ -1.02
CCDC149-206ENST00000508236 CDKAL1Q5VV42 579 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 LINC00114Q6XXX2 140 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 PIK3AP1Q6ZUJ8 805 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 SRGAP1Q7Z6B7 1085 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 TXNRD3Q86VQ6 643 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 TMEM139Q8IV31 216 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 ZNF444Q8N0Y2 327 aaPredicted RBP8.71□□□□□ -1.02
CCDC149-206ENST00000508236 MFSD4AQ8N468 514 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 TC2NQ8N9U0 490 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 TGFBRAP1Q8WUH2 860 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 PANX2Q96RD6 677 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 NAA15Q9BXJ9 866 aaKnown RBP8.71□□□□□ -1.02
CCDC149-206ENST00000508236 UBXN6Q9BZV1 441 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 DUSP15Q9H1R2 295 aaPredicted RBP8.71□□□□□ -1.02
CCDC149-206ENST00000508236 MKNK2Q9HBH9 465 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 AP5S1Q9NUS5 200 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 ZNF446Q9NWS9 450 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 DNAJC28Q9NX36 388 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 PPP2R2CQ9Y2T4 447 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 PCDHA11Q9Y5I1 949 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.71□□□□□ -1.02
CCDC149-206ENST00000508236 MYH8P13535 1937 aa8.71□□□□□ -1.02
CCDC149-206ENST00000508236 SSU72P8A0A1W2PR75 194 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 A6NNZ2 444 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 AKR1B15C9JRZ8 316 aaPredicted RBP8.7□□□□□ -1.02
CCDC149-206ENST00000508236 LAD1O00515 517 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 KCNK3O14649 394 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 TPP1O14773 563 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 MYL3P08590 195 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 TSPY3P0CV98 308 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 TSPY8P0CW00 308 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 GNAT1P11488 350 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 SMARCA1P28370 1054 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 KIF11P52732 1056 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 NFIXQ14938 502 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 ZNF827Q17R98 1081 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 PRRT3Q5FWE3 981 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 ATAT1Q5SQI0 421 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 TRIM65Q6PJ69 517 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 ARHGAP36Q6ZRI8 547 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 SMIM5Q71RC9 77 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 PTF1AQ7RTS3 328 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 PTRH1Q86Y79 214 aaKnown RBP8.7□□□□□ -1.02
CCDC149-206ENST00000508236 MIER2Q8N344 545 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 C4orf32Q8N8J7 132 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 CNBD1Q8NA66 436 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 SH3RF3Q8TEJ3 882 aaPredicted RBP8.7□□□□□ -1.02
CCDC149-206ENST00000508236 SLC16A10Q8TF71 515 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 RPGRQ92834 1020 aaKnown RBP8.7□□□□□ -1.02
CCDC149-206ENST00000508236 CCDC51Q96ER9 411 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 HEXIM2Q96MH2 286 aaKnown RBP8.7□□□□□ -1.02
CCDC149-206ENST00000508236 ACAP3Q96P50 834 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 MED15Q96RN5 788 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 SH3GL3Q99963 347 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 IRX2Q9BZI1 471 aaPredicted RBP8.7□□□□□ -1.02
CCDC149-206ENST00000508236 TRIT1Q9H3H1 467 aaKnown RBP8.7□□□□□ -1.02
CCDC149-206ENST00000508236 ZMAT4Q9H898 229 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 SP110Q9HB58 689 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 CASS4Q9NQ75 786 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 IL17RBQ9NRM6 502 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 SAMSN1Q9NSI8 373 aaKnown RBP8.7□□□□□ -1.02
CCDC149-206ENST00000508236 USP21Q9UK80 565 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 TCFL5Q9UL49 500 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 DDX60LQ5H9U9 1706 aaKnown RBP8.7□□□□□ -1.02
CCDC149-206ENST00000508236 BAZ2BQ9UIF8 2168 aaKnown RBP8.7□□□□□ -1.02
CCDC149-206ENST00000508236 ATXN2Q99700 1313 aaKnown RBP8.7□□□□□ -1.02
CCDC149-206ENST00000508236 UBR3Q6ZT12 1888 aa8.7□□□□□ -1.02
CCDC149-206ENST00000508236 A0A087WUV0 522 aaPredicted RBP8.69□□□□□ -1.02
CCDC149-206ENST00000508236 LCHNA4D1U4 455 aa8.69□□□□□ -1.02
CCDC149-206ENST00000508236 C7orf72A4D263 438 aa8.69□□□□□ -1.02
CCDC149-206ENST00000508236 HIP1RO75146 1068 aa8.69□□□□□ -1.02
CCDC149-206ENST00000508236 COQ9O75208 318 aa8.69□□□□□ -1.02
CCDC149-206ENST00000508236 TBC1D8O95759 1140 aa8.69□□□□□ -1.02
CCDC149-206ENST00000508236 MYBP10242 640 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms