RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 TSC2P49815 1807 aa16.14■□□□□ 0.17
RNF4-210ENST00000508235 OR6C75A6NL08 312 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 H3BQ06 376 aaPredicted RBP16.13■□□□□ 0.17
RNF4-210ENST00000508235 TBC1D4O60343 1298 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 STAU1O95793 577 aaKnown RBP16.13■□□□□ 0.17
RNF4-210ENST00000508235 GNA14O95837 355 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 C4BPAP04003 597 aaKnown RBP16.13■□□□□ 0.17
RNF4-210ENST00000508235 EPCAMP16422 314 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 GTF2H1P32780 548 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 OR1D2P34982 312 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 NLRP12P59046 1061 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 MCCD1P59942 119 aaPredicted RBP16.13■□□□□ 0.17
RNF4-210ENST00000508235 DLG4P78352 724 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 ITIH3Q06033 890 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 DLX2Q07687 328 aaPredicted RBP16.13■□□□□ 0.17
RNF4-210ENST00000508235 ZACNQ401N2 412 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 RBM43Q6ZSC3 357 aaKnown RBP16.13■□□□□ 0.17
RNF4-210ENST00000508235 DPH6Q7L8W6 267 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 FILIP1Q7Z7B0 1213 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 TMEM86AQ8N2M4 240 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 TOP6BLQ8N6T0 577 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 EEF2KMTQ96G04 330 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 BORCS6Q96GS4 357 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 MSLNLQ96KJ4 702 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 ASB2Q96Q27 587 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 SFXN1Q9H9B4 322 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 ARMCX3Q9UH62 379 aaPredicted RBP16.13■□□□□ 0.17
RNF4-210ENST00000508235 MAFFQ9ULX9 164 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 SNX9Q9Y5X1 595 aa16.13■□□□□ 0.17
RNF4-210ENST00000508235 TGM5O43548 720 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 CST3P01034 146 aaPredicted RBP16.12■□□□□ 0.17
RNF4-210ENST00000508235 TNNC1P63316 161 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
RNF4-210ENST00000508235 TFF2Q03403 129 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 SMAD4Q13485 552 aaKnown RBP16.12■□□□□ 0.17
RNF4-210ENST00000508235 LIN9Q5TKA1 542 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 TDRD10Q5VZ19 366 aaKnown RBP16.12■□□□□ 0.17
RNF4-210ENST00000508235 TPGS2Q68CL5 300 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 CES5AQ6NT32 575 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 LILRA6Q6PI73 481 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 SASS6Q6UVJ0 657 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 SV2AQ7L0J3 742 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 RTL10Q7L3V2 364 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 FRMD5Q7Z6J6 570 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 SMRP1Q8NCR6 262 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 ZNF461Q8TAF7 563 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 TAF4BQ92750 862 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 DUSP9Q99956 384 aaKnown RBP16.12■□□□□ 0.17
RNF4-210ENST00000508235 TMEM8AQ9HCN3 771 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 MAN1C1Q9NR34 630 aa16.12■□□□□ 0.17
RNF4-210ENST00000508235 TIMM13Q9Y5L4 95 aaPredicted RBP16.12■□□□□ 0.17
RNF4-210ENST00000508235 CLSTN1O94985 981 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 FAM163BP0C2L3 166 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 CPB1P15086 417 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 ERCC5P28715 1186 aaPredicted RBP16.11■□□□□ 0.17
RNF4-210ENST00000508235 STX17P56962 302 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 NCOA4Q13772 614 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 SGSM1Q2NKQ1 1148 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 CCDC40Q4G0X9 1142 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 WSCD1Q658N2 575 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 KRT39Q6A163 491 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 PTCRAQ6ISU1 281 aaPredicted RBP16.11■□□□□ 0.17
RNF4-210ENST00000508235 SYCE2Q6PIF2 218 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 CYP26C1Q6V0L0 522 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 CCDC149Q6ZUS6 474 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 KREMEN2Q8NCW0 462 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 CCDC150Q8NCX0 1101 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 FAM84AQ96KN4 292 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 IMPG2Q9BZV3 1241 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 VRTNQ9H8Y1 702 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 ZDHHC7Q9NXF8 308 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 FBXW11Q9UKB1 542 aa16.11■□□□□ 0.17
RNF4-210ENST00000508235 ADAM12O43184 909 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 TRIM49P0CI25 452 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 TRIM49CP0CI26 452 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 CCDC192P0DO97 292 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 P4HA1P13674 534 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 ATF2P15336 505 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 ELF1P32519 619 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 PIK3CAP42336 1068 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 LHX1P48742 406 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 ARPP19P56211 112 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 MYL6P60660 151 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 MYL7Q01449 175 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 ROR1Q01973 937 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 SMARCB1Q12824 385 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 CLUL1Q15846 466 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 TPD52L1Q16890 204 aaPredicted RBP16.1■□□□□ 0.17
RNF4-210ENST00000508235 UVSSAQ2YD98 709 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 ZNF699Q32M78 642 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 DPCR1Q3MIW9 517 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 WDR72Q3MJ13 1102 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 DCAF17Q5H9S7 520 aaPredicted RBP16.1■□□□□ 0.17
RNF4-210ENST00000508235 TJAP1Q5JTD0 557 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 C1orf220Q5T0J3 134 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 TCERG1LQ5VWI1 586 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 RSPO2Q6UXX9 243 aaPredicted RBP16.1■□□□□ 0.17
RNF4-210ENST00000508235 C15orf39Q6ZRI6 1047 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 PDCL2Q8N4E4 241 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms