RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 A0A1W2PRU2 124 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 MTMR11A4FU01 709 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 SPTLC1O15269 473 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 NCAM2O15394 837 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 KINO60870 393 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 PSMC3P17980 439 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 ABCD1P33897 745 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 ID4P47928 161 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 EPHB3P54753 998 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 LILRA4P59901 499 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 CSTF1Q05048 431 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 MYBPC2Q14324 1141 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 ZNF528Q3MIS6 628 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 ADALQ6DHV7 355 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 CENPPQ6IPU0 288 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 USP49Q70CQ1 688 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 DYMQ7RTS9 669 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 SFR1Q86XK3 245 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 TMC8Q8IU68 726 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 TTC9BQ8N6N2 239 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 KRI1Q8N9T8 703 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 ATAD1Q8NBU5 361 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 DEPDC1BQ8WUY9 529 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 IRF7Q92985 503 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 EPSTI1Q96J88 318 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 HINFPQ9BQA5 517 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 IKZF4Q9H2S9 585 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 SLITRK6Q9H5Y7 841 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 ZNF334Q9HCZ1 680 aaPredicted RBP12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 NDRG2Q9UN36 371 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 SLC27A5Q9Y2P5 690 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 DERAQ9Y315 318 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 CLIC4Q9Y696 253 aa12.51□□□□□ -0.41
HMGCS1-204ENST00000507293 ZNF638Q14966 1978 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 MYO15AQ9UKN7 3530 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 SPTBN4Q9H254 2564 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 ANO9A1A5B4 782 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 HEPACAM2A8MVW5 462 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 PIRO00625 290 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 MAN2B1O00754 1011 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 SOAT2O75908 522 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 DDIT3P35638 169 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 RPS9P46781 194 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 ALDH1A3P47895 512 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 FZD5Q13467 585 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 CUL4AQ13619 759 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 PTPAQ15257 358 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 STXBP5Q5T5C0 1151 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 SLFN12LQ6IEE8 588 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 TSSK4Q6SA08 328 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 KIAA2013Q8IYS2 634 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 SUMF1Q8NBK3 374 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 OR10T2Q8NGX3 314 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 RSPRY1Q96DX4 576 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 GPR88Q9GZN0 384 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 ST6GALNAC4Q9H4F1 302 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 ASB7Q9H672 318 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 TRPV4Q9HBA0 871 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 STK17AQ9UEE5 414 aa12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 FBXO2Q9UK22 296 aaPredicted RBP12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 AGO2Q9UKV8 859 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-204ENST00000507293 CFAP54Q96N23 3096 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 ZNF263O14978 683 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 CYP11A1P05108 521 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 PAX3P23760 479 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 CDR1P51861 262 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 MTAPQ13126 283 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 RESTQ13127 1097 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 ARMCX5Q6P1M9 558 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 EFCAB13Q8IY85 973 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 DCLK2Q8N568 766 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 POMGNT1Q8WZA1 660 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 FAM3CQ92520 227 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 RUBCNQ92622 972 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 HVCN1Q96D96 273 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 SEPT5Q99719 369 aaPredicted RBP12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 TRPV5Q9NQA5 729 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 PRMT8Q9NR22 394 aaPredicted RBP12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 DPP3Q9NY33 737 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 CCDC39Q9UFE4 941 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 C2CD2Q9Y426 696 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 ASB3Q9Y575 518 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 STYXL1Q9Y6J8 313 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 PIAS3Q9Y6X2 628 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 OTOGLQ3ZCN5 2332 aa12.49□□□□□ -0.41
HMGCS1-204ENST00000507293 MYMKA6NI61 221 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 ARNTLO00327 626 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 CYB561D2O14569 222 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 PPP1R37O75864 691 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 PDCP20941 246 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 GABRR2P28476 465 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 TAF6P49848 677 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 FOXK2Q01167 660 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 MGAT5BQ3V5L5 792 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 SLC39A12Q504Y0 691 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 RRAGBQ5VZM2 374 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 FAM173BQ6P4H8 233 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 CRELD2Q6UXH1 353 aaPredicted RBP12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 ZNF720Q7Z2F6 126 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms