RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 KRT25Q7Z3Z0 450 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 FERMT3Q86UX7 667 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 EXOC8Q8IYI6 725 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 PDCD7Q8N8D1 485 aaKnown RBP7.97□□□□□ -1.13
VCAN-207ENST00000507162 FANCBQ8NB91 859 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 MDGA1Q8NFP4 955 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 SPIRE2Q8WWL2 714 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 TCP11Q8WWU5 503 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 EXOC4Q96A65 974 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 SPACA7Q96KW9 195 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 RIT2Q99578 217 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 PRDM16Q9HAZ2 1276 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 DNAAF2Q9NVR5 837 aaKnown RBP7.97□□□□□ -1.13
VCAN-207ENST00000507162 OBP2AQ9NY56 170 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 KIAA1522Q9P206 1035 aaPredicted RBP7.97□□□□□ -1.13
VCAN-207ENST00000507162 BCCIPQ9P287 314 aaKnown RBP eCLIP7.97□□□□□ -1.13
VCAN-207ENST00000507162 DNMT3LQ9UJW3 386 aa7.97□□□□□ -1.13
VCAN-207ENST00000507162 H7C4K7 107 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 TBX3O15119 743 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 ALDH1A2O94788 518 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 PRAMEF12O95522 483 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 ATXN1LP0C7T5 689 aaKnown RBP7.96□□□□□ -1.14
VCAN-207ENST00000507162 ARSAP15289 507 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 P2RY2P41231 377 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 MCM2P49736 904 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 EPHB3P54753 998 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 PSMC5P62195 406 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 CXADRP78310 365 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 CYP4A11Q02928 519 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 SLC14A1Q13336 389 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 PCBP1Q15365 356 aaKnown RBP eCLIP7.96□□□□□ -1.14
VCAN-207ENST00000507162 TMEM132AQ24JP5 1023 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 LMBRD2Q68DH5 695 aaPredicted RBP7.96□□□□□ -1.14
VCAN-207ENST00000507162 PPP1R18Q6NYC8 613 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 CD300LGQ6UXG3 332 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 RNF19BQ6ZMZ0 732 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 RASSF3Q86WH2 238 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 FMNL3Q8IVF7 1028 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 PGBD3Q8N328 593 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 TMTC2Q8N394 836 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 GALNT15Q8N3T1 639 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 TTC16Q8NEE8 873 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 CRYGNQ8WXF5 182 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 CCDC136Q96JN2 1154 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 CNOT6LQ96LI5 555 aaKnown RBP7.96□□□□□ -1.14
VCAN-207ENST00000507162 KRTAP3-3Q9BYR6 98 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 KRTAP3-2Q9BYR7 98 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 CAPN10Q9HC96 672 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 HPS4Q9NQG7 708 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 NXF1Q9UBU9 619 aaKnown RBP7.96□□□□□ -1.14
VCAN-207ENST00000507162 FBXL5Q9UKA1 691 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 SLC12A7Q9Y666 1083 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 TAF6LQ9Y6J9 622 aa7.96□□□□□ -1.14
VCAN-207ENST00000507162 A0A1B0GUA9 196 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 HIP1O00291 1037 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 ADAMTS3O15072 1205 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 PRC1O43663 620 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 KRT10P13645 584 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 CPB1P15086 417 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 GABRR2P28476 465 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 CIITAP33076 1130 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 RFC5P40937 340 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 ALDH1A3P47895 512 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 CSRP3P50461 194 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 CYP4F8P98187 520 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 MBTD1Q05BQ5 628 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 CAMK2BQ13554 666 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 TFDP1Q14186 410 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 LY6DQ14210 128 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 AMHR2Q16671 573 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 PLEKHG6Q3KR16 790 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 GLRA4Q5JXX5 417 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 CC2D1AQ6P1N0 951 aaPredicted RBP7.95□□□□□ -1.14
VCAN-207ENST00000507162 GAREM2Q75VX8 874 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 TEX2Q8IWB9 1127 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 RDM1Q8NG50 284 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 EXOC6Q8TAG9 804 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 EZH1Q92800 747 aaPredicted RBP7.95□□□□□ -1.14
VCAN-207ENST00000507162 SLC5A5Q92911 643 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 CD101Q93033 1021 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 LENG9Q96B70 501 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 FAM83CQ9BQN1 747 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 POLR3CQ9BUI4 534 aaPredicted RBP7.95□□□□□ -1.14
VCAN-207ENST00000507162 LRRC3Q9BY71 257 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 SEMA4CQ9C0C4 833 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 DHX33Q9H6R0 707 aaKnown RBP7.95□□□□□ -1.14
VCAN-207ENST00000507162 GOLGA2P5Q9HBQ8 144 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 BARHL2Q9NY43 387 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 AFF4Q9UHB7 1163 aaKnown RBP7.95□□□□□ -1.14
VCAN-207ENST00000507162 IL17BQ9UHF5 180 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 SRPK3Q9UPE1 567 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 GDAQ9Y2T3 454 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 AK5Q9Y6K8 562 aa7.95□□□□□ -1.14
VCAN-207ENST00000507162 KIF26AQ9ULI4 1882 aaPredicted RBP7.95□□□□□ -1.14
VCAN-207ENST00000507162 FLNCQ14315 2725 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 CABIN1Q9Y6J0 2220 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 PTPRBP23467 1997 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 ANTXRLA6NF34 631 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 ERVH48-1M5A8F1 160 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 PLK4O00444 970 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms