RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 CD207Q9UJ71 328 aa19.57■□□□□ 0.72
NPHP4-210ENST00000506941 FBXL5Q9UKA1 691 aa19.57■□□□□ 0.72
NPHP4-210ENST00000506941 NOTCH4Q99466 2003 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 BICDL2A1A5D9 508 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 H7C4K7 107 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 SLC16A3O15427 465 aaKnown RBP19.56■□□□□ 0.72
NPHP4-210ENST00000506941 VNN1O95497 513 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 SRGAP2BP0DMP2 458 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 EPB41P11171 864 aaKnown RBP19.56■□□□□ 0.72
NPHP4-210ENST00000506941 KRT13P13646 458 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 MRPS5P82675 430 aaKnown RBP19.56■□□□□ 0.72
NPHP4-210ENST00000506941 YWHAHQ04917 246 aaPredicted RBP19.56■□□□□ 0.72
NPHP4-210ENST00000506941 ENPEPQ07075 957 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 PPP3CAQ08209 521 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 RAB33AQ14088 237 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 CTXN3Q4LDR2 81 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 WSCD1Q658N2 575 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 OVOS1Q6IE37 1185 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 SLC8B1Q6J4K2 584 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 ZNF280DQ6N043 979 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 C15orf39Q6ZRI6 1047 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 C12orf76Q8N812 135 aaPredicted RBP19.56■□□□□ 0.72
NPHP4-210ENST00000506941 SMRP1Q8NCR6 262 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 ASB2Q96Q27 587 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 APOL5Q9BWW9 433 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 GDAP2Q9NXN4 497 aa19.56■□□□□ 0.72
NPHP4-210ENST00000506941 GRXCR2A6NFK2 248 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 IKBKBO14920 756 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 AP3M2P53677 418 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 NLRP12P59046 1061 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 MYL6P60660 151 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 ROR1Q01973 937 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 MYO1EQ12965 1108 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 BIRC3Q13489 604 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 ZACNQ401N2 412 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 USP37Q86T82 979 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 MLKLQ8NB16 471 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 RTP3Q9BQQ7 232 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 XYLT2Q9H1B5 865 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 S1PR5Q9H228 398 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 DZANK1Q9NVP4 752 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 TMEM63CQ9P1W3 806 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 CDH22Q9UJ99 828 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 FBXW11Q9UKB1 542 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 L1RE1Q9UN81 338 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 SNX9Q9Y5X1 595 aa19.55■□□□□ 0.72
NPHP4-210ENST00000506941 WDR27A2RRH5 827 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 C1RP00736 705 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 GCLMP48507 274 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 AAK1Q2M2I8 961 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 CCDC183Q5T5S1 534 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 SV2AQ7L0J3 742 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 LIMS2Q7Z4I7 341 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 PDCL2Q8N4E4 241 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 ELMO3Q96BJ8 720 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 CEP63Q96MT8 703 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 TMEM209Q96SK2 561 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 RWDD2AQ9UIY3 292 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 DSEQ9UL01 958 aa19.54■□□□□ 0.72
NPHP4-210ENST00000506941 ARHGEF37A1IGU5 675 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 MBTPS2O43462 519 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 PHACTR2O75167 634 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 OR4Q2P0C623 313 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 HOXB8P17481 243 aaPredicted RBP19.53■□□□□ 0.72
NPHP4-210ENST00000506941 ARPP19P56211 112 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 SMAD4Q13485 552 aaKnown RBP19.53■□□□□ 0.72
NPHP4-210ENST00000506941 TRPC3Q13507 836 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 NCOA4Q13772 614 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 SOWAHAQ2M3V2 549 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 RARS2Q5T160 578 aaKnown RBP19.53■□□□□ 0.72
NPHP4-210ENST00000506941 PTCRAQ6ISU1 281 aaPredicted RBP19.53■□□□□ 0.72
NPHP4-210ENST00000506941 FILIP1Q7Z7B0 1213 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 KREMEN2Q8NCW0 462 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 OR10T2Q8NGX3 314 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 MMRN2Q9H8L6 949 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 R3HCC1Q9Y3T6 440 aaKnown RBP19.53■□□□□ 0.72
NPHP4-210ENST00000506941 DOCK8Q8NF50 2099 aa19.53■□□□□ 0.72
NPHP4-210ENST00000506941 MYH10P35580 1976 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 HUS1O60921 280 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 RFPL2O75678 378 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 ABLIM3O94929 683 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 STAU1O95793 577 aaKnown RBP19.52■□□□□ 0.72
NPHP4-210ENST00000506941 HLA-DRAP01903 254 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 BMP1P13497 986 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 OSTM1Q86WC4 334 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 TOP6BLQ8N6T0 577 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 ZNF461Q8TAF7 563 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 TAS1R2Q8TE23 839 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 HDAC7Q8WUI4 952 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 SRRTQ9BXP5 876 aaKnown RBP19.52■□□□□ 0.72
NPHP4-210ENST00000506941 PLEKHA4Q9H4M7 779 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 SFXN1Q9H9B4 322 aa19.52■□□□□ 0.72
NPHP4-210ENST00000506941 ARMCX3Q9UH62 379 aaPredicted RBP19.52■□□□□ 0.72
NPHP4-210ENST00000506941 USP15Q9Y4E8 981 aaPredicted RBP19.52■□□□□ 0.72
NPHP4-210ENST00000506941 GREB1Q4ZG55 1949 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 OR6C75A6NL08 312 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 HCRTO43612 131 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 VNN2O95498 520 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 WEE2P0C1S8 567 aa19.51■□□□□ 0.71
NPHP4-210ENST00000506941 CPB1P15086 417 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms