RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 DSTYKQ6XUX3 929 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 RNF19BQ6ZMZ0 732 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 EPM2AIP1Q7L775 607 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 TMEM105Q8N8V8 129 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 IQUBQ8NA54 791 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 CXorf38Q8TB03 319 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 DHX58Q96C10 678 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 SAAL1Q96ER3 474 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 BORCS6Q96GS4 357 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 C7orf25Q9BPX7 421 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 CBWD1Q9BRT8 395 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 FAM213AQ9BRX8 229 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 RPP25Q9BUL9 199 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 TMEM206Q9H813 350 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 SLC2A4RGQ9NR83 387 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 DPP3Q9NY33 737 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 CEP72Q9P209 647 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 ZDHHC9Q9Y397 364 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 MTMR11A4FU01 709 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 KRBA1A5PL33 1030 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 NRG2O14511 850 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 KIAA0391O15091 583 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 EIF3DO15371 548 aaKnown RBP eCLIP9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 POLR2DO15514 142 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 EXTL3O43909 919 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 MICAL2O94851 1124 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 OR4Q2P0C623 313 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 AOC1P19801 751 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 CCR2P41597 374 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 TAF6P49848 677 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 PTPN5P54829 565 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 FOXD4L6Q3SYB3 417 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 FAM26FQ5R3K3 315 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 FOXD4L3Q6VB84 417 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 MTSS1LQ765P7 747 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 USP37Q86T82 979 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 SYCP3Q8IZU3 236 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 OR10T2Q8NGX3 314 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 ZNF507Q8TCN5 953 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 ING5Q8WYH8 240 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 HPS3Q969F9 1004 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 TMEM209Q96SK2 561 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 RTP3Q9BQQ7 232 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 CRISPLD1Q9H336 500 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 GDE1Q9NZC3 331 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 FBXL21Q9UKT6 434 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 CFAP45Q9UL16 551 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 MRPS23Q9Y3D9 190 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 YIPF1Q9Y548 306 aa9.81□□□□□ -0.84
PDLIM5-209ENST00000506632 GOLGA8IPA6NC78 632 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 GOLGA8JA6NMD2 632 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 TGFB1I1O43294 461 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 GALR2O43603 387 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 MOSPD3O75425 235 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 CFHP08603 1231 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 CEBPBP17676 345 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 ME1P48163 572 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 ASIC1P78348 528 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 TWF1Q12792 350 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 CENPPQ6IPU0 288 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 ARMCX5Q6P1M9 558 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 STXBP4Q6ZWJ1 553 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 UNC13DQ70J99 1090 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 SIX5Q8N196 739 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 GPD1LQ8N335 351 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 C1orf127Q8N9H9 656 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 ST13P5Q8NFI4 369 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 GPR152Q8TDT2 470 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 TCEAL4Q96EI5 215 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 CORO1BQ9BR76 489 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 LRRC3Q9BY71 257 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 ZCWPW1Q9H0M4 648 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 DNAJC25Q9H1X3 360 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 MFSD1Q9H3U5 465 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 PCIF1Q9H4Z3 704 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 RBAKQ9NYW8 714 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 HSFX1Q9UBD0 423 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 DSEQ9UL01 958 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 UBE4BO95155 1302 aa9.8□□□□□ -0.84
PDLIM5-209ENST00000506632 PVALEFA0A1B0GWK0 134 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 KPNA7A9QM74 516 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 CYB561D2O14569 222 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 ZNF197O14709 1029 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 PI15O43692 258 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 ACTN4O43707 911 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 ECI2O75521 394 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 FCARP24071 287 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 CASP1P29466 404 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 POLR2BP30876 1174 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 PNPLA4P41247 253 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 GPC5P78333 572 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 TFAMQ00059 246 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 DUSP4Q13115 394 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 BMT2Q1RMZ1 405 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 SV2CQ496J9 727 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 WSCD1Q658N2 575 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 SCARA3Q6AZY7 606 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 PHLDB3Q6NSJ2 640 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 TMC8Q8IU68 726 aa9.79□□□□□ -0.84
PDLIM5-209ENST00000506632 CBWD2Q8IUF1 395 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms