RNA–Protein interactions for RNA: ENST00000506388.2

RCN1-202, Transcript of reticulocalbin 1, humanhuman

TSL 1 (best)

Gene RCN1, Length 1,658 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-202ENST00000506388 ZNF558Q96NG5 402 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 PLVAPQ9BX97 442 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 UBE2TQ9NPD8 197 aaPredicted RBP14.3□□□□□ -0.12
RCN1-202ENST00000506388 DNAJC12Q9UKB3 198 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 DSEQ9UL01 958 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 C5orf67F2Z3F1 127 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 GABRDO14764 452 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 ACO1P21399 889 aaKnown RBP14.3□□□□□ -0.12
RCN1-202ENST00000506388 POLR2FP61218 127 aaKnown RBP14.3□□□□□ -0.12
RCN1-202ENST00000506388 SOWAHAQ2M3V2 549 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 TIGD5Q53EQ6 642 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 SPOPLQ6IQ16 392 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 FAM117BQ6P1L5 589 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 TMC6Q7Z403 805 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 CNGA4Q8IV77 575 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 TMEM130Q8N3G9 435 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 COLGALT1Q8NBJ5 622 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 ZNF397Q8NF99 534 aaPredicted RBP14.3□□□□□ -0.12
RCN1-202ENST00000506388 IGSF21Q96ID5 467 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 SENP8Q96LD8 212 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 SAMD11Q96NU1 681 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 GPR88Q9GZN0 384 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 LUC7L2Q9Y383 392 aaKnown RBP14.3□□□□□ -0.12
RCN1-202ENST00000506388 SNX9Q9Y5X1 595 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 FHOD1Q9Y613 1164 aa14.3□□□□□ -0.12
RCN1-202ENST00000506388 SF3B1O75533 1304 aaKnown RBP eCLIP14.29□□□□□ -0.126e-10■■■■■ 187.2
RCN1-202ENST00000506388 TULP1O00294 542 aaPredicted RBP14.29□□□□□ -0.12
RCN1-202ENST00000506388 HUS1O60921 280 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 RB1P06400 928 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 TPM1P09493 284 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 PLCB3Q01970 1234 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 CACNA2D4Q7Z3S7 1137 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 PPFIBP1Q86W92 1011 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 UNC93AQ86WB7 457 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 DRC7Q8IY82 874 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 FAM71AQ8IYT1 594 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 APPL2Q8NEU8 664 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 DNAJC7Q99615 494 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 OXCT2Q9BYC2 517 aaPredicted RBP14.29□□□□□ -0.12
RCN1-202ENST00000506388 SPG21Q9NZD8 308 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 AIPL1Q9NZN9 384 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 PCDHB12Q9Y5F1 795 aa14.29□□□□□ -0.12
RCN1-202ENST00000506388 GOLGA6L6A8MZA4 724 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 F8VZ95 297 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 CYB561D2O14569 222 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 TADA2AO75478 443 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 OAZ2O95190 189 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 ITGB1P05556 798 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 ODC1P11926 461 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 FGFR3P22607 806 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 WARSP23381 471 aaKnown RBP14.28□□□□□ -0.12
RCN1-202ENST00000506388 LHX1P48742 406 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 FXR1P51114 621 aaKnown RBP eCLIP14.28□□□□□ -0.12
RCN1-202ENST00000506388 APBA1Q02410 837 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 LRMPQ12912 555 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 RAB30Q15771 203 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.28□□□□□ -0.12
RCN1-202ENST00000506388 RRAGAQ7L523 313 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 HCSTQ9UBK5 93 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 CACNG4Q9UBN1 327 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 NXF1Q9UBU9 619 aaKnown RBP14.28□□□□□ -0.12
RCN1-202ENST00000506388 BARX2Q9UMQ3 279 aaPredicted RBP14.28□□□□□ -0.12
RCN1-202ENST00000506388 LZTS1Q9Y250 596 aa14.28□□□□□ -0.12
RCN1-202ENST00000506388 LAMA2P24043 3122 aaKnown RBP14.28□□□□□ -0.12
RCN1-202ENST00000506388 LINC01553A4QN01 128 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 MFAP3LO75121 409 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 CILPO75339 1184 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 CCDC172P0C7W6 258 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 IGFBP6P24592 240 aaPredicted RBP14.27□□□□□ -0.12
RCN1-202ENST00000506388 CASP14P31944 242 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 BMPR1AP36894 532 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 ZNF132P52740 706 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 GSDMDP57764 484 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 MRPL58Q14197 206 aaKnown RBP14.27□□□□□ -0.12
RCN1-202ENST00000506388 DRAP1Q14919 205 aaPredicted RBP14.27□□□□□ -0.12
RCN1-202ENST00000506388 PTPN21Q16825 1174 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 FUT10Q6P4F1 479 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 GJB7Q6PEY0 223 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 DDX53Q86TM3 631 aaKnown RBP14.27□□□□□ -0.12
RCN1-202ENST00000506388 PDCL2Q8N4E4 241 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 KBTBD7Q8WVZ9 684 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 ARID3AQ99856 593 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 DNAI2Q9GZS0 605 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 CHST7Q9NS84 486 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 CISHQ9NSE2 258 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 KIAA1257Q9ULG3 409 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 L1RE1Q9UN81 338 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 POLIQ9UNA4 740 aa14.27□□□□□ -0.12
RCN1-202ENST00000506388 PRG3Q9Y2Y8 225 aaPredicted RBP14.27□□□□□ -0.12
RCN1-202ENST00000506388 RNF225M0QZC1 329 aaPredicted RBP14.26□□□□□ -0.13
RCN1-202ENST00000506388 FOXN3O00409 490 aaPredicted RBP14.26□□□□□ -0.13
RCN1-202ENST00000506388 PTMAP06454 111 aaKnown RBP14.26□□□□□ -0.13
RCN1-202ENST00000506388 FECHP22830 423 aa14.26□□□□□ -0.13
RCN1-202ENST00000506388 KRT9P35527 623 aa14.26□□□□□ -0.13
RCN1-202ENST00000506388 SOX5P35711 763 aa14.26□□□□□ -0.13
RCN1-202ENST00000506388 PRKCIP41743 596 aa14.26□□□□□ -0.13
RCN1-202ENST00000506388 STAT1P42224 750 aa14.26□□□□□ -0.13
RCN1-202ENST00000506388 SMAD3P84022 425 aaKnown RBP14.26□□□□□ -0.13
RCN1-202ENST00000506388 CDK17Q00537 523 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms