RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 SCN10AQ9Y5Y9 1956 aa6.4□□□□□ -1.39
SCLT1-207ENST00000506233 GRID2IPA4D2P6 1211 aa6.4□□□□□ -1.39
SCLT1-207ENST00000506233 ZNF891A8MT65 544 aaPredicted RBP6.4□□□□□ -1.39
SCLT1-207ENST00000506233 DDX3YO15523 660 aaKnown RBP6.4□□□□□ -1.39
SCLT1-207ENST00000506233 JMJD7P0C870 316 aa6.4□□□□□ -1.39
SCLT1-207ENST00000506233 TARSP26639 723 aaKnown RBP6.4□□□□□ -1.39
SCLT1-207ENST00000506233 RPS26P62854 115 aaKnown RBP6.4□□□□□ -1.39
SCLT1-207ENST00000506233 ASIC1P78348 528 aa6.4□□□□□ -1.39
SCLT1-207ENST00000506233 MAN2A1Q16706 1144 aa6.4□□□□□ -1.39
SCLT1-207ENST00000506233 NCAPH2Q6IBW4 605 aa6.4□□□□□ -1.39
SCLT1-207ENST00000506233 NELL2Q99435 816 aa6.4□□□□□ -1.39
SCLT1-207ENST00000506233 DHX33Q9H6R0 707 aaKnown RBP6.4□□□□□ -1.39
SCLT1-207ENST00000506233 ZFATQ9P243 1243 aa6.4□□□□□ -1.39
SCLT1-207ENST00000506233 PAXBP1Q9Y5B6 917 aa6.4□□□□□ -1.39
SCLT1-207ENST00000506233 CFBP00751 764 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 SFPQP23246 707 aaKnown RBP eCLIP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 DNM2P50570 870 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 TRIM14Q14142 442 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 INAVAQ3KP66 663 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 FAM26FQ5R3K3 315 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 ADGRD1Q6QNK2 874 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 TRERF1Q96PN7 1200 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 INTS7Q9NVH2 962 aaKnown RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 RMND1Q9NWS8 449 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 GTF2A1LQ9UNN4 478 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 EPN1Q9Y6I3 576 aaPredicted RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 BLACEA4D250 179 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 ADH1AP07327 375 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 LPOP22079 712 aaPredicted RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 POLR2BP30876 1174 aaKnown RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 KRT9P35527 623 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 ERVK-21P61565 698 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 HEATR6Q6AI08 1181 aaKnown RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 FRMD5Q7Z6J6 570 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 AFAP1L1Q8TED9 768 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 CCDC51Q96ER9 411 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 MPP4Q96JB8 637 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 MFSD14AQ96MC6 490 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 POP1Q99575 1024 aaKnown RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 TXLNGYQ9BZA5 131 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 ZCCHC2Q9C0B9 1178 aaKnown RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 APOBEC3GQ9HC16 384 aaKnown RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 CNTN6Q9UQ52 1028 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 CASP8AP2Q9UKL3 1982 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 F8VZ95 297 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 GCOM1H8Y6P7 765 aaPredicted RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 NPTXRO95502 500 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 ADH1CP00326 375 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 POLR2MP0CAP2 368 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 UCHL3P15374 230 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 ITPKAP23677 461 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 IGFBP6P24592 240 aaPredicted RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 PPP2R2AP63151 447 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 DHX9Q08211 1270 aaKnown RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 DHCR24Q15392 516 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 CXorf57Q6NSI4 855 aaKnown RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 SYDE1Q6ZW31 735 aaPredicted RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 NCAPG2Q86XI2 1143 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 NELFCDQ8IXH7 590 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 CCDC112Q8NEF3 446 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 ASAP3Q8TDY4 903 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 RHBDD1Q8TEB9 315 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 SEC14L1Q92503 715 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 USP6NLQ92738 828 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 SKA1Q96BD8 255 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 ARHGEF26Q96DR7 871 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 WRNIP1Q96S55 665 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 OSMRQ99650 979 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 PYM1Q9BRP8 204 aaKnown RBP6.39□□□□□ -1.39
SCLT1-207ENST00000506233 FLRT1Q9NZU1 646 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 ZNF69Q9UC07 566 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 NEU2Q9Y3R4 380 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 KDM3AQ9Y4C1 1321 aa6.39□□□□□ -1.39
SCLT1-207ENST00000506233 GTPBP10A4D1E9 387 aaKnown RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 LRRIQ3A6PVS8 624 aaPredicted RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 SEC31AO94979 1220 aaKnown RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 PIGRP01833 764 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 NR3C1P04150 777 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 LMNB1P20700 586 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 KLRC1P26715 233 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 HOXC8P31273 242 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 LRCH2Q5VUJ6 765 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 CDCA2Q69YH5 1023 aaPredicted RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 CC2D1AQ6P1N0 951 aaPredicted RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 ARHGAP27Q6ZUM4 889 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 MYOCDQ8IZQ8 938 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 CPA6Q8N4T0 437 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 SLC9A7Q96T83 725 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 ZNF577Q9BSK1 485 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 MINDY3Q9H8M7 445 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 KLHL11Q9NVR0 708 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 EVLQ9UI08 416 aaPredicted RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 MYPNQ86TC9 1320 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 TRIOO75962 3097 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 FAM155AB1AL88 458 aaPredicted RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 CLIC2O15247 247 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 SLC16A3O15427 465 aaKnown RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 NCK2O43639 380 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 MMP20O60882 483 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 POU3F2P20265 443 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms