RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 A0A087WZ62 844 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 SMIM35A0A1B0GVV1 85 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 TTI1O43156 1089 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 CELF2O95319 508 aaKnown RBP12.03□□□□□ -0.48
NFKB1-205ENST00000505458 ECEL1O95672 775 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 PTPN7P35236 360 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 ASPAP45381 313 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 RBP5P82980 135 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 MAMLD1Q13495 774 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 SLMAPQ14BN4 828 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 OLFML2BQ68BL8 750 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 FNIP1Q8TF40 1166 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 KRT35Q92764 455 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 ACAP3Q96P50 834 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 FDXACB1Q9BRP7 624 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-205ENST00000505458 XYLT2Q9H1B5 865 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 R3HDMLQ9H3Y0 253 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 ZHX1Q9UKY1 873 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-205ENST00000505458 A6NJR5 290 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 ATMINO43313 823 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-205ENST00000505458 XPOTO43592 962 aaKnown RBP12.03□□□□□ -0.48
NFKB1-205ENST00000505458 ITGA4P13612 1032 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 CPT1AP50416 773 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 CDR1P51861 262 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 IGBP1P78318 339 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 ACAP1Q15027 740 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 EEF1DP3Q658K8 133 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 PRELID2Q8N945 189 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 C3orf20Q8ND61 904 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 TRAPPC12Q8WVT3 735 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 CPA5Q8WXQ8 436 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 FAM204AQ9H8W3 233 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 CWC15Q9P013 229 aaKnown RBP12.03□□□□□ -0.48
NFKB1-205ENST00000505458 KPNA6O60684 536 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 WEE2P0C1S8 567 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 ATF7P17544 494 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-205ENST00000505458 COILP38432 576 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-205ENST00000505458 MYO1EQ12965 1108 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 CCDC137Q6PK04 289 aaKnown RBP12.03□□□□□ -0.48
NFKB1-205ENST00000505458 ERICH1Q86X53 443 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 RCOR2Q8IZ40 523 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 FOXP3Q9BZS1 431 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 ACP6Q9NPH0 428 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 ST7Q9NRC1 585 aa12.03□□□□□ -0.48
NFKB1-205ENST00000505458 A0A1B0GUA9 196 aa12.02□□□□□ -0.48
NFKB1-205ENST00000505458 TLR3O15455 904 aaKnown RBP12.02□□□□□ -0.48
NFKB1-205ENST00000505458 F2P00734 622 aa12.02□□□□□ -0.48
NFKB1-205ENST00000505458 IVLP07476 585 aa12.02□□□□□ -0.48
NFKB1-205ENST00000505458 CITO14578 2027 aa12.02□□□□□ -0.48
NFKB1-205ENST00000505458 AGPSO00116 658 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 PPFIA2O75334 1257 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 RPS6KA5O75582 802 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 CXCL8P10145 99 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 PYGMP11217 842 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 GNAT1P11488 350 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 SMPD1P17405 629 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 DESP17661 470 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 CALCOCO2Q13137 446 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 ZNF211Q13398 564 aaPredicted RBP12.02□□□□□ -0.49
NFKB1-205ENST00000505458 SGO2Q562F6 1265 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 MORN1Q5T089 497 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 MMS22LQ6ZRQ5 1243 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 POLNQ7Z5Q5 900 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 HOOK3Q86VS8 718 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 WHRNQ9P202 907 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 EFR3BQ9Y2G0 817 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 TSPAN1O60635 241 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 CST3P01034 146 aaPredicted RBP12.02□□□□□ -0.49
NFKB1-205ENST00000505458 HMGCRP04035 888 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 VDRP11473 427 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 RDXP35241 583 aaKnown RBP12.02□□□□□ -0.49
NFKB1-205ENST00000505458 YARSP54577 528 aaKnown RBP12.02□□□□□ -0.49
NFKB1-205ENST00000505458 PTPROQ16827 1216 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 ODF2Q5BJF6 829 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 EMC10Q5UCC4 262 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 CCDC105Q8IYK2 499 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 UMODL1Q5DID0 1318 aa12.02□□□□□ -0.49
NFKB1-205ENST00000505458 ESYT3A0FGR9 886 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 SRRM3A6NNA2 597 aaPredicted RBP12.01□□□□□ -0.49
NFKB1-205ENST00000505458 B4GALT5O43286 388 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 DAPK3O43293 454 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 SETSIPP0DME0 302 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 ARF4P18085 180 aaPredicted RBP12.01□□□□□ -0.49
NFKB1-205ENST00000505458 ECHS1P30084 290 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 RGS2P41220 211 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 PTGIRP43119 386 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 NOTUMQ6P988 496 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 DCUN1D2Q6PH85 259 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 IPO4Q8TEX9 1081 aaKnown RBP12.01□□□□□ -0.49
NFKB1-205ENST00000505458 ZIM3Q96PE6 472 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 STMN4Q9H169 189 aaPredicted RBP12.01□□□□□ -0.49
NFKB1-205ENST00000505458 TMEM191CA6NGB0 347 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 LACTBL1A8MY62 500 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 GPR25O00155 361 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 ZNF286BP0CG31 522 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 INCA1Q0VD86 236 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 ZNF268Q14587 947 aaPredicted RBP12.01□□□□□ -0.49
NFKB1-205ENST00000505458 AGBL2Q5U5Z8 902 aa12.01□□□□□ -0.49
NFKB1-205ENST00000505458 SLC27A1Q6PCB7 646 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms