RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 TPH2Q8IWU9 490 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 THNSL1Q8IYQ7 743 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 RNF149Q8NC42 400 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 C2CD4AQ8NCU7 369 aaPredicted RBP5.4□□□□□ -1.54
CDH9-203ENST00000505045 GLIS3Q8NEA6 775 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 AUTS2Q8WXX7 1259 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 C8orf76Q96K31 380 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 MSLNLQ96KJ4 702 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 EIF2AQ9BY44 585 aaKnown RBP5.4□□□□□ -1.54
CDH9-203ENST00000505045 GCOM2Q9BZD3 368 aaPredicted RBP5.4□□□□□ -1.54
CDH9-203ENST00000505045 NIF3L1Q9GZT8 377 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 TMEM117Q9H0C3 514 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 LMAN2LQ9H0V9 348 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 CYP4F12Q9HCS2 524 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 ABCB6Q9NP58 842 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 TLR9Q9NR96 1032 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 FAM105AQ9NUU6 356 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 CACNG4Q9UBN1 327 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 INPP5FQ9Y2H2 1132 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 HES2Q9Y543 173 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 PP2D1A8MPX8 630 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 EIF1AYO14602 144 aaKnown RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 MBTPS2O43462 519 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 TSPAN1O60635 241 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 USO1O60763 962 aaKnown RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 ZC3H11AO75152 810 aaKnown RBP eCLIP5.39□□□□□ -1.55
CDH9-203ENST00000505045 ZSCAN20P17040 1043 aaPredicted RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 LAG3P18627 525 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 SFPQP23246 707 aaKnown RBP eCLIP5.39□□□□□ -1.55
CDH9-203ENST00000505045 GLRA2P23416 452 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 MAP4P27816 1152 aaKnown RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 NDUFV1P49821 464 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 TOB1P50616 345 aaPredicted RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 MBTD1Q05BQ5 628 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 ADAM15Q13444 863 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 KCNC3Q14003 757 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 ZNF174Q15697 407 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 DUSP6Q16828 381 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 FBLN7Q53RD9 439 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 MAEAQ7L5Y9 396 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 CATSPER4Q7RTX7 472 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 CATSPER3Q86XQ3 398 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 ZNF280BQ86YH2 543 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 SLFN12Q8IYM2 578 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 SLC39A11Q8N1S5 342 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 SMRP1Q8NCR6 262 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 FBXO18Q8NFZ0 1043 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 PSPC1Q8WXF1 523 aaKnown RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 CCDC74AQ96AQ1 378 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 CPB2Q96IY4 423 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 TCF25Q9BQ70 676 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 KIFC3Q9BVG8 833 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 APOL5Q9BWW9 433 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 CXCL16Q9H2A7 254 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 ZSWIM4Q9H7M6 989 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 POLD4Q9HCU8 107 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 BRMS1Q9HCU9 246 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 TBC1D13Q9NVG8 400 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 PCDHA12Q9UN75 941 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 PCDHB6Q9Y5E3 794 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 PDCD11Q14690 1871 aaKnown RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 KMT2EQ8IZD2 1858 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 MYO10Q9HD67 2058 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 MYH15Q9Y2K3 1946 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 PIEZO1Q92508 2521 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 DOCK8Q8NF50 2099 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 MARCH6O60337 910 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 DDHD2O94830 711 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 LYPLA2O95372 231 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 OR52Z1P0C646 297 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 ARL2P36404 184 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 TECP42680 631 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 DNM2P50570 870 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 BCAR1P56945 870 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 SOX4Q06945 474 aaPredicted RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 TRIM29Q14134 588 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 SMAD2Q15796 467 aaKnown RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 IL17AQ16552 155 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 NAALADL2Q58DX5 795 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 TTC38Q5R3I4 469 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 ODR4Q5SWX8 454 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 CDPF1Q6NVV7 123 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 LLGL2Q6P1M3 1020 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 NOSTRINQ8IVI9 506 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 ABI1Q8IZP0 508 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 EFHBQ8N7U6 833 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 C4orf32Q8N8J7 132 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 SHKBP1Q8TBC3 707 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 MRPS27Q92552 414 aaKnown RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 EZH1Q92800 747 aaPredicted RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 DMRTB1Q96MA1 342 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 ZNF558Q96NG5 402 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 LLPHQ9BRT6 129 aaKnown RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 TRAIPQ9BWF2 469 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 GBP3Q9H0R5 595 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 POLR3FQ9H1D9 316 aaPredicted RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 NXF3Q9H4D5 531 aaKnown RBP5.39□□□□□ -1.55
CDH9-203ENST00000505045 NRDE2Q9H7Z3 1164 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 DACT1Q9NYF0 836 aa5.39□□□□□ -1.55
CDH9-203ENST00000505045 USP15Q9Y4E8 981 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms