RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 EPHA5P54756 1037 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 PEX3P56589 373 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 SHC2P98077 582 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 CYP4F8P98187 520 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 GUCY1B3Q02153 619 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 YWHAHQ04917 246 aaPredicted RBP7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 FCHO2Q0JRZ9 810 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 FOXC1Q12948 553 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 DUSP4Q13115 394 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 TRIM29Q14134 588 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 MRPL58Q14197 206 aaKnown RBP7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 ARHGAP29Q52LW3 1261 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 SEZ6Q53EL9 994 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 GPR158Q5T848 1215 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 RNF43Q68DV7 783 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 UNQ6494/PRO21346Q6UXR6 183 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 CACNA2D4Q7Z3S7 1137 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 RALGPS2Q86X27 583 aaPredicted RBP7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 TMC8Q8IU68 726 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 TTC9BQ8N6N2 239 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 GAB3Q8WWW8 586 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 KIFAP3Q92845 792 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 E2F7Q96AV8 911 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 ACAP3Q96P50 834 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 MTMR9Q96QG7 549 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 HHIPQ96QV1 700 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 ACO2Q99798 780 aaKnown RBP7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 EDEM2Q9BV94 578 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 MRPL4Q9BYD3 311 aaKnown RBP7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 TM6SF1Q9BZW5 370 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 GPR88Q9GZN0 384 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 DNAJC25Q9H1X3 360 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 BHMT2Q9H2M3 363 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 CRISPLD1Q9H336 500 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 SLC8A2Q9UPR5 921 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 SLC27A5Q9Y2P5 690 aa7.53□□□□□ -1.2
NPIPB3-203ENST00000504841 GREB1Q4ZG55 1949 aa7.52□□□□□ -1.2
NPIPB3-203ENST00000504841 JAK2O60674 1132 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 PFKFB2O60825 505 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 VNN2O95498 520 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 PRAMEF12O95522 483 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 MCF2P10911 925 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 FDPSP14324 419 aaKnown RBP7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 KCNE1P15382 129 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 RPA1P27694 616 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 GABRR2P28476 465 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 RPL9P32969 192 aaKnown RBP7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 MATR3P43243 847 aaKnown RBP eCLIP7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 CREB5Q02930 508 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 ZNF252P-AS1Q0IIN9 211 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 DMP1Q13316 513 aaPredicted RBP7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 PLD1Q13393 1074 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 CCINQ13939 588 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 ZNF174Q15697 407 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 ECM1Q16610 540 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 ARHGAP15Q53QZ3 475 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 XKR4Q5GH76 650 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 HAUS3Q68CZ6 603 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 ALKAL1Q6UXT8 129 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 DSTYKQ6XUX3 929 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 USP37Q86T82 979 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 ATAD1Q8NBU5 361 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 BPIFB1Q8TDL5 484 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 LRRC3BQ96PB8 259 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 GCNAQ96QF7 691 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 SEPT5Q99719 369 aaPredicted RBP7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 LPIN3Q9BQK8 851 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 MKNK1Q9BUB5 465 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 POLR3CQ9BUI4 534 aaPredicted RBP7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 LRRC3Q9BY71 257 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 KMT5AQ9NQR1 393 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 POLR3BQ9NW08 1133 aaPredicted RBP7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 CNTN3Q9P232 1028 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 ZMIZ1Q9ULJ6 1067 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 KIAA1024Q9UPX6 916 aa7.52□□□□□ -1.21
NPIPB3-203ENST00000504841 CNOT1A5YKK6 2376 aaKnown RBP7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 MTMR11A4FU01 709 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 TM4SF5O14894 197 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 GIPC1O14908 333 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 DCLK1O15075 740 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 MEFVO15553 781 aaPredicted RBP7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 LARGE1O95461 756 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 CXCL8P10145 99 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 HOXA6P31267 233 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 GBP1P32455 592 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 NPTX2P47972 431 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 MCM2P49736 904 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 GUCY2FP51841 1108 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 MLLT6P55198 1093 aaPredicted RBP7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 GRSF1Q12849 480 aaKnown RBP eCLIP7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 VEPH1Q14D04 833 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 ELF2Q15723 593 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 ITPRIPL2Q3MIP1 535 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 FSTL4Q6MZW2 842 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 MPZL3Q6UWV2 235 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 GAREM2Q75VX8 874 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 TAS1R3Q7RTX0 852 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 DNAJB7Q7Z6W7 309 aaPredicted RBP7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 TTC16Q8NEE8 873 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 LOXL4Q96JB6 756 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms