RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 RIPK3Q9Y572 518 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 SNX14Q9Y5W7 946 aa8.61□□□□□ -1.03
UBE2B-204ENST00000504431 BAZ2BQ9UIF8 2168 aaKnown RBP8.61□□□□□ -1.03
UBE2B-204ENST00000504431 VWA5AO00534 786 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 NFIBO00712 420 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 REC8O95072 547 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 PDHBP11177 359 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 FAHP16930 419 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 CYP2B6P20813 491 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 IBSPP21815 317 aaPredicted RBP8.6□□□□□ -1.03
UBE2B-204ENST00000504431 MESP2Q0VG99 397 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 FAM110CQ1W6H9 321 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 IFIT1BQ5T764 474 aaKnown RBP8.6□□□□□ -1.03
UBE2B-204ENST00000504431 DGKHQ86XP1 1220 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 CCAR1Q8IX12 1150 aaKnown RBP8.6□□□□□ -1.03
UBE2B-204ENST00000504431 IGDCC4Q8TDY8 1250 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 NUP133Q8WUM0 1156 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 CLEC4DQ8WXI8 215 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 PIBF1Q8WXW3 757 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 USP7Q93009 1102 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 TTC14Q96N46 770 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 PCIF1Q9H4Z3 704 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 BCAS3Q9H6U6 928 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 HOMER2Q9NSB8 354 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 PTPN22Q9Y2R2 807 aa8.6□□□□□ -1.03
UBE2B-204ENST00000504431 MYPNQ86TC9 1320 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 ZNFX1Q9P2E3 1918 aaKnown RBP8.59□□□□□ -1.03
UBE2B-204ENST00000504431 SCDO00767 359 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 BUB1BO60566 1050 aaPredicted RBP8.59□□□□□ -1.03
UBE2B-204ENST00000504431 DTNBO60941 627 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 LTFP02788 710 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 MED14OSP0DP75 135 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 MCM5P33992 734 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 FLT3LGP49771 235 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 DSG1Q02413 1049 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 GRIN1Q05586 938 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 WTAPQ15007 396 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 TEPPQ6URK8 271 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 CD300LDQ6UXZ3 194 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 GPR142Q7Z601 462 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 B3GNT8Q7Z7M8 397 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 C11orf74Q86VG3 221 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 PASD1Q8IV76 773 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 POU5F2Q8N7G0 328 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 PRPF38AQ8NAV1 312 aaKnown RBP8.59□□□□□ -1.03
UBE2B-204ENST00000504431 REPS2Q8NFH8 660 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 ANKS1AQ92625 1134 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 SIGLEC10Q96LC7 697 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 SPATC1LQ9H0A9 340 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 LY9Q9HBG7 655 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 MORF4L1Q9UBU8 362 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 FEM1BQ9UK73 627 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 NAP1L2Q9ULW6 460 aaPredicted RBP8.59□□□□□ -1.03
UBE2B-204ENST00000504431 ADAMTS5Q9UNA0 930 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 RABGAP1Q9Y3P9 1069 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 TELO2Q9Y4R8 837 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 B3GALT1Q9Y5Z6 326 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 IRAK3Q9Y616 596 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 PLXNB2O15031 1838 aa8.59□□□□□ -1.03
UBE2B-204ENST00000504431 ERICH2A1L162 156 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 TCAF2A6NFQ2 919 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 SH2B2O14492 632 aaPredicted RBP8.58□□□□□ -1.04
UBE2B-204ENST00000504431 KCNK3O14649 394 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 DHX16O60231 1041 aaKnown RBP8.58□□□□□ -1.04
UBE2B-204ENST00000504431 ZBED4O75132 1171 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 KRT37O76014 449 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 PGK2P07205 417 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 ZKSCAN1P17029 563 aaPredicted RBP8.58□□□□□ -1.04
UBE2B-204ENST00000504431 CASTP20810 708 aaKnown RBP8.58□□□□□ -1.04
UBE2B-204ENST00000504431 STAT2P52630 851 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 EXOSC10Q01780 885 aaKnown RBP8.58□□□□□ -1.04
UBE2B-204ENST00000504431 ZNF543Q08ER8 600 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 SEPT7Q16181 437 aaKnown RBP8.58□□□□□ -1.04
UBE2B-204ENST00000504431 PKN1Q16512 942 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 CCL14Q16627 93 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 SLC35G1Q2M3R5 365 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 SYDE2Q5VT97 1194 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 SNRNP48Q6IEG0 339 aaKnown RBP8.58□□□□□ -1.04
UBE2B-204ENST00000504431 CC2D1AQ6P1N0 951 aaPredicted RBP8.58□□□□□ -1.04
UBE2B-204ENST00000504431 RBM12BQ8IXT5 1001 aaKnown RBP8.58□□□□□ -1.04
UBE2B-204ENST00000504431 COA7Q96BR5 231 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 ABHD8Q96I13 439 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 UPF3BQ9BZI7 483 aaKnown RBP8.58□□□□□ -1.04
UBE2B-204ENST00000504431 BRINP2Q9C0B6 783 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 KCNK12Q9HB15 430 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 GCM1Q9NP62 436 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 ACSS2Q9NR19 701 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 SRRDQ9UH36 339 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 MCM8Q9UJA3 840 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 GJD2Q9UKL4 321 aa8.58□□□□□ -1.04
UBE2B-204ENST00000504431 CTDP1Q9Y5B0 961 aaPredicted RBP8.58□□□□□ -1.04
UBE2B-204ENST00000504431 DDX49Q9Y6V7 483 aaKnown RBP8.58□□□□□ -1.04
UBE2B-204ENST00000504431 A0A0G2JMZ2 1700 aa8.57□□□□□ -1.04
UBE2B-204ENST00000504431 ZNF536O15090 1300 aa8.57□□□□□ -1.04
UBE2B-204ENST00000504431 hCG_1642624A0A1W2PR95 340 aa8.57□□□□□ -1.04
UBE2B-204ENST00000504431 PRAMEF25A6NGN4 478 aa8.57□□□□□ -1.04
UBE2B-204ENST00000504431 CCDC69A6NI79 296 aa8.57□□□□□ -1.04
UBE2B-204ENST00000504431 RFXAPO00287 272 aa8.57□□□□□ -1.04
UBE2B-204ENST00000504431 ETV2O00321 342 aaPredicted RBP8.57□□□□□ -1.04
UBE2B-204ENST00000504431 BRINP1O60477 761 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms