RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ERMARDQ5T6L9 678 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 C1QTNF12Q5T7M4 302 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 C11orf63Q6NUN7 778 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 ADGRG6Q86SQ4 1221 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 DZIP1Q86YF9 867 aaKnown RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 LRRC3Q9BY71 257 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 UNKQ9C0B0 810 aaKnown RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 DMGDHQ9UI17 866 aaKnown RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 CNOT7Q9UIV1 285 aaKnown RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 SAMM50Q9Y512 469 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 BZW2Q9Y6E2 419 aaKnown RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 A0A1B0GVL5 298 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 TRIM75PA6NK02 468 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 ELL2O00472 640 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 RGS16O15492 202 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 GNA11P29992 359 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 MSH2P43246 934 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 SEC13P55735 322 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 POLE2P56282 527 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 PPIL2Q13356 520 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 PABPC1LQ4VXU2 614 aaKnown RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 IL23RQ5VWK5 629 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 RSBN1LQ6PCB5 846 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 FOXR1Q6PIV2 292 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 RAD9BQ6WBX8 426 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 SYCE1Q8N0S2 351 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 CCDC89Q8N998 374 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 WDR60Q8WVS4 1066 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 RNPC3Q96LT9 517 aaKnown RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 TMEM47Q9BQJ4 181 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 TRPV4Q9HBA0 871 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 SLC39A2Q9NP94 309 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 SLC52A3Q9NQ40 469 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 SAR1AQ9NR31 198 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 C2CD2Q9Y426 696 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 MDC1Q14676 2089 aaKnown RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 A0A1W2PPC1 479 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 NVLO15381 856 aaKnown RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 SERPINB2P05120 415 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 LDHCP07864 332 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 HNRNPCP07910 306 aaKnown RBP eCLIP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 CXCL9Q07325 125 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 GRB10Q13322 594 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 CPZQ66K79 652 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 CATSPERGQ6ZRH7 1159 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 C16orf71Q8IYS4 520 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 NECAB1Q8N987 351 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 LYSMD1Q96S90 227 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 ADGRE3Q9BY15 652 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 ASCC2Q9H1I8 757 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 LHX5Q9H2C1 402 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 PALMDQ9NP74 551 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 PPANQ9NQ55 473 aaKnown RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 MRGBPQ9NV56 204 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 C3orf70A6NLC5 250 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-204ENST00000503468 LGALS16A8MUM7 142 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 F8W8V4 182 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 AGPSO00116 658 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 ARFIP1P53367 373 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 CACNB3P54284 484 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 SLC12A3P55017 1021 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 CNGA3Q16281 694 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 SLC9C1Q4G0N8 1177 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 C4orf46Q504U0 113 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 LIN52Q52LA3 116 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 FRA10AC1Q70Z53 315 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 FAM71AQ8IYT1 594 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 SPICE1Q8N0Z3 855 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 PTPRN2Q92932 1015 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 FAM227BQ96M60 508 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 ABHD10Q9NUJ1 306 aa2.96□□□□□ -1.94
NEDD4-204ENST00000503468 PCSK5Q92824 1860 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SCN1AP35498 2009 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 DKK1O94907 266 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ESRRBO95718 433 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 EGFRP00533 1210 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 OAS1P00973 400 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 BCAMP50895 628 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ATN1P54259 1190 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 EVA1CP58658 441 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CTBSQ01459 385 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 DIXDC1Q155Q3 683 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 COLEC12Q5KU26 742 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TTC39AQ5SRH9 613 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PM20D1Q6GTS8 502 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 RWDD4Q6NW29 188 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 BICDL1Q6ZP65 573 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PRR23CQ6ZRP0 262 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TBC1D1Q86TI0 1168 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MYLK4Q86YV6 388 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 RIBC1Q8N443 379 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TMEM151AQ8N4L1 468 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CPA6Q8N4T0 437 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CSGALNACT2Q8N6G5 542 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ATP11CQ8NB49 1132 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CATSPER1Q8NEC5 780 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CMASQ8NFW8 434 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 DLG3Q92796 817 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 RPGRQ92834 1020 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CHAMP1Q96JM3 812 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms