RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 PCDHGC3Q9UN70 934 aa20.31■□□□□ 0.84
ARHGEF28-205ENST00000503341 FGGP02679 453 aa20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 CTNNA1P35221 906 aaKnown RBP20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 MARCKSL1P49006 195 aa20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 CDH8P55286 799 aa20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 RBP5P82980 135 aa20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 ZNF211Q13398 564 aaPredicted RBP20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 MMS22LQ6ZRQ5 1243 aa20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 HDXQ7Z353 690 aa20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 KLHL7Q8IXQ5 586 aa20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 KIF12Q96FN5 646 aa20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 HPDLQ96IR7 371 aa20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 DERAQ9Y315 318 aa20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 PCDHA3Q9Y5H8 950 aa20.3■□□□□ 0.84
ARHGEF28-205ENST00000503341 CCDC66A2RUB6 948 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 SPOPO43791 374 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 STAU1O95793 577 aaKnown RBP20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 MMP8P22894 467 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 PLA2G4AP47712 749 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 CRYBB1P53674 252 aaPredicted RBP20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 GNASQ5JWF2 1037 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 PLEKHA7Q6IQ23 1121 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 KRT222Q8N1A0 295 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 SNX27Q96L92 541 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 TRIM7Q9C029 511 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 UPF3AQ9H1J1 476 aaKnown RBP20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 CXCL16Q9H2A7 254 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 SMYD3Q9H7B4 428 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 CYP3A43Q9HB55 503 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 TRIP12Q14669 1992 aaPredicted RBP20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 CITO14578 2027 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 GLI1P08151 1106 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 ITGA4P13612 1032 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 CDH5P33151 784 aaPredicted RBP20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 RAD23BP54727 409 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 CBX1P83916 185 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 TMEM35BQ8NCS4 154 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 WHAMMQ8TF30 809 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 MTG1Q9BT17 334 aaPredicted RBP20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 ZNF518BQ9C0D4 1074 aa20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 MRPL47Q9HD33 250 aaKnown RBP20.29■□□□□ 0.84
ARHGEF28-205ENST00000503341 RAD51CO43502 376 aa20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 PAEPP09466 180 aa20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 P4HA1P13674 534 aa20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 TNFRSF8P28908 595 aa20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 PRKCZQ05513 592 aa20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 MAMLD1Q13495 774 aa20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 CLUL1Q15846 466 aa20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 ZBTB6Q15916 424 aa20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 GSPT2Q8IYD1 628 aaKnown RBP20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 WDTC1Q8N5D0 677 aa20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 C1orf131Q8NDD1 294 aaKnown RBP20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 ZMAT2Q96NC0 199 aaKnown RBP20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 NAP1L3Q99457 506 aaPredicted RBP20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 GDF3Q9NR23 364 aa20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 HES2Q9Y543 173 aa20.28■□□□□ 0.84
ARHGEF28-205ENST00000503341 MYO1FO00160 1098 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 SART1O43290 800 aaKnown RBP20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 CILPO75339 1184 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 HEXIM1O94992 359 aaKnown RBP20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 PGK1P00558 417 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 YARSP54577 528 aaKnown RBP20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 NKX3-2P78367 333 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 CASP8Q14790 479 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 AADACL2Q6P093 401 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 ALKAL1Q6UXT8 129 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 SCINQ9Y6U3 715 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 SEPT4O43236 478 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 SLC1A1P43005 524 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 TRIM32Q13049 653 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 NOGQ13253 232 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 TAF2Q6P1X5 1199 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 CXCL17Q6UXB2 119 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 IFT20Q8IY31 132 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 SLC4A11Q8NBS3 891 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 AENQ8WTP8 325 aaKnown RBP20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 TWNKQ96RR1 684 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 TRIM6Q9C030 488 aaPredicted RBP20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 ELOVL4Q9GZR5 314 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 DDX47Q9H0S4 455 aaKnown RBP20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 NXF3Q9H4D5 531 aaKnown RBP20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 PIN4Q9Y237 131 aaKnown RBP20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 NR2E1Q9Y466 385 aa20.27■□□□□ 0.84
ARHGEF28-205ENST00000503341 RALGAPA2Q2PPJ7 1873 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 MED7O43513 233 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 PROSCO94903 275 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 CALB1P05937 261 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 PYGMP11217 842 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 CD19P15391 556 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 CAP1Q01518 475 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 UBXN11Q5T124 520 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 LHX5Q9H2C1 402 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 EPB41L5Q9HCM4 733 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 PARVAQ9NVD7 372 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 CNTN3Q9P232 1028 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 HMGXB4Q9UGU5 601 aa20.26■□□□□ 0.83
ARHGEF28-205ENST00000503341 AOC2O75106 756 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 RWDD2BP57060 319 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 GUCY2DQ02846 1103 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 CACNB2Q08289 660 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms