RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ARHGAP29Q52LW3 1261 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 SLFN12LQ6IEE8 588 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 CENPPQ6IPU0 288 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 RNF19BQ6ZMZ0 732 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 HAUS6Q7Z4H7 955 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 ITIH5Q86UX2 942 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 ZSCAN18Q8TBC5 510 aaPredicted RBP6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 SPATA18Q8TC71 538 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 ING5Q8WYH8 240 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 C18orf25Q96B23 403 aaPredicted RBP6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 TCEAL4Q96EI5 215 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 PNMA5Q96PV4 448 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 NCDNQ9UBB6 729 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 GMEB2Q9UKD1 530 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 CPSF3Q9UKF6 684 aaKnown RBP6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 YIPF1Q9Y548 306 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 STYXL1Q9Y6J8 313 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 PIAS3Q9Y6X2 628 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 SCN1AP35498 2009 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 CEP250Q9BV73 2442 aa6.64□□□□□ -1.35
LSM3P4-201ENST00000502948 A0A0B4J269 797 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 MED19A0JLT2 244 aaPredicted RBP6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 HEPACAM2A8MVW5 462 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 AKAP3O75969 853 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 FRYLO94915 3013 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 PLA2G4BP0C869 781 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 CXCL8P10145 99 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 ODC1P11926 461 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 CD72P21854 359 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 DDX6P26196 483 aaKnown RBP eCLIP6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 GDI1P31150 447 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 ALDH1A3P47895 512 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 CXCL12P48061 93 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 LIMK1P53667 647 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 ATXN1P54253 815 aaKnown RBP6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 OSTNP61366 133 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 CCINQ13939 588 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 ZNF638Q14966 1978 aaKnown RBP6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 PTPAQ15257 358 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 CSRP2Q16527 193 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 RSPO4Q2I0M5 234 aaPredicted RBP6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 ARSHQ5FYA8 562 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 OVOS1Q6IE37 1185 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 KIAA1549LQ6ZVL6 1849 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 KCNK18Q7Z418 384 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 USP37Q86T82 979 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 LONP2Q86WA8 852 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 DCLK2Q8N568 766 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 KIAA1958Q8N8K9 716 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 SHKBP1Q8TBC3 707 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 SPPL2BQ8TCT7 592 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 NETO1Q8TDF5 533 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 CSGALNACT1Q8TDX6 532 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 DDX1Q92499 740 aaKnown RBP6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 HVCN1Q96D96 273 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 LOXL4Q96JB6 756 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 ZBTB45Q96K62 511 aaPredicted RBP6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 CEP295NLQ96MC4 621 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 ZSWIM3Q96MP5 696 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 FIZ1Q96SL8 496 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 HINFPQ9BQA5 517 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 MKNK1Q9BUB5 465 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 HAPLN2Q9GZV7 340 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 DNAJC25Q9H1X3 360 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 LMAN1LQ9HAT1 526 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 PARVGQ9HBI0 331 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 TUBGCP4Q9UGJ1 667 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 TBX20Q9UMR3 447 aa6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 MORC2Q9Y6X9 1032 aaPredicted RBP6.63□□□□□ -1.35
LSM3P4-201ENST00000502948 SPAG17Q6Q759 2223 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 MTMR11A4FU01 709 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 SFI1A8K8P3 1242 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 PP2D1A8MPX8 630 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 LACTBL1A8MY62 500 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 K7ESF4 209 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 SLC30A4O14863 429 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 HNRNPDLO14979 420 aaKnown RBP6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 TRAK2O60296 914 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 ATG13O75143 517 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 SEC24BO95487 1268 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 MYL4P12829 197 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 CDC25CP30307 473 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 CTHP32929 405 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 LONP1P36776 959 aaKnown RBP6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 MCM2P49736 904 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 LIG4P49917 911 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 AMPD2Q01433 879 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 DUSP4Q13115 394 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 GAS6Q14393 721 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 GRM2Q14416 872 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 ZNF268Q14587 947 aaPredicted RBP6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 NBR1Q14596 966 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 RABEP1Q15276 862 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 TEAD2Q15562 447 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 ENOX2Q16206 610 aaKnown RBP6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 ARHGAP15Q53QZ3 475 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 ARMCX5Q6P1M9 558 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 GAREM2Q75VX8 874 aa6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 DNAJB7Q7Z6W7 309 aaPredicted RBP6.62□□□□□ -1.35
LSM3P4-201ENST00000502948 ARID3BQ8IVW6 561 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms