RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 MFSD14AQ96MC6 490 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 CYP4F11Q9HBI6 524 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 WDR6Q9NNW5 1121 aaKnown RBP13.8□□□□□ -0.2
HSPG2-213ENST00000498495 DMAC2Q9NW81 257 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 POLIQ9UNA4 740 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 TRAF3IP3Q9Y228 551 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 USTQ9Y2C2 406 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 PCDHA5Q9Y5H7 936 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 ANK1P16157 1881 aa13.8□□□□□ -0.2
HSPG2-213ENST00000498495 CCL16O15467 120 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 XYLBO75191 536 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 PAPLNO95428 1278 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 LRG1P02750 347 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 NR3C1P04150 777 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 CYP11A1P05108 521 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
HSPG2-213ENST00000498495 HOXA9P31269 272 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 ADCY1Q08828 1119 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 BFSP1Q12934 665 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 MYO1EQ12965 1108 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 ZNF658Q5TYW1 1059 aaPredicted RBP13.79□□□□□ -0.2
HSPG2-213ENST00000498495 CEP135Q66GS9 1140 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 OTOP3Q7RTS5 596 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 TRAPPC11Q7Z392 1133 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 LRRC52Q8N7C0 313 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 TMEM174Q8WUU8 243 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 ERCC4Q92889 916 aaPredicted RBP13.79□□□□□ -0.2
HSPG2-213ENST00000498495 ACSF2Q96CM8 615 aaPredicted RBP13.79□□□□□ -0.2
HSPG2-213ENST00000498495 FAM84AQ96KN4 292 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 CGRRF1Q99675 332 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 EPHX3Q9H6B9 360 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 AFF4Q9UHB7 1163 aaKnown RBP13.79□□□□□ -0.2
HSPG2-213ENST00000498495 MAFFQ9ULX9 164 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 FRMD4BQ9Y2L6 1034 aa13.79□□□□□ -0.2
HSPG2-213ENST00000498495 MTCL1Q9Y4B5 1905 aaKnown RBP13.79□□□□□ -0.2
HSPG2-213ENST00000498495 A0A0C4DFX4 3053 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 C2CD4DB7Z1M9 353 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 PI4K2BG5E9Z4 385 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 HUS1O60921 280 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 OR4Q2P0C623 313 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 UBE2HP62256 183 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 GPR17Q13304 367 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 ADAM9Q13443 819 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 TRPC3Q13507 836 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 WSCD1Q658N2 575 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 SCARA3Q6AZY7 606 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 RNF19BQ6ZMZ0 732 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 GRASPQ7Z6J2 395 aaPredicted RBP13.78□□□□□ -0.2
HSPG2-213ENST00000498495 TCEAL8Q8IYN2 117 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 SMYD4Q8IYR2 804 aaPredicted RBP13.78□□□□□ -0.2
HSPG2-213ENST00000498495 TDRD5Q8NAT2 981 aaKnown RBP13.78□□□□□ -0.2
HSPG2-213ENST00000498495 CXorf38Q8TB03 319 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 KHSRPQ92945 711 aaKnown RBP eCLIP13.78□□□□□ -0.2
HSPG2-213ENST00000498495 HPDLQ96IR7 371 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 GTPBP4Q9BZE4 634 aaKnown RBP13.78□□□□□ -0.2
HSPG2-213ENST00000498495 SIX4Q9UIU6 781 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 SNX9Q9Y5X1 595 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 PTPRJQ12913 1337 aa13.78□□□□□ -0.2
HSPG2-213ENST00000498495 DCXO43602 365 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 PHACTR2O75167 634 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 SEC24AO95486 1093 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 CST3P01034 146 aaPredicted RBP13.77□□□□□ -0.21
HSPG2-213ENST00000498495 PTPN2P17706 415 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 NR2F2P24468 414 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 GBP2P32456 591 aaPredicted RBP13.77□□□□□ -0.21
HSPG2-213ENST00000498495 PRCPP42785 496 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 CASP4P49662 377 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 AP3M2P53677 418 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 NFIL3Q16649 462 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 ISM2Q6H9L7 571 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 ZDHHC14Q8IZN3 488 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 SPATA20Q8TB22 786 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 PARD3BQ8TEW8 1205 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 ZNF516Q92618 1163 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 PGLYRP2Q96PD5 576 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 GDAP2Q9NXN4 497 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 LIMD1Q9UGP4 676 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 MUTYHQ9UIF7 546 aa13.77□□□□□ -0.21
HSPG2-213ENST00000498495 CLUHO75153 1309 aa13.76□□□□□ -0.21
HSPG2-213ENST00000498495 POU2F2P09086 479 aa13.76□□□□□ -0.21
HSPG2-213ENST00000498495 FSHRP23945 695 aa13.76□□□□□ -0.21
HSPG2-213ENST00000498495 DUSP4Q13115 394 aa13.76□□□□□ -0.21
HSPG2-213ENST00000498495 DPH6Q7L8W6 267 aa13.76□□□□□ -0.21
HSPG2-213ENST00000498495 DCP1BQ8IZD4 617 aaKnown RBP13.76□□□□□ -0.21
HSPG2-213ENST00000498495 TMEM86AQ8N2M4 240 aa13.76□□□□□ -0.21
HSPG2-213ENST00000498495 ELMOD1Q8N336 334 aa13.76□□□□□ -0.21
HSPG2-213ENST00000498495 TOP6BLQ8N6T0 577 aa13.76□□□□□ -0.21
HSPG2-213ENST00000498495 ZNF512Q96ME7 567 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-213ENST00000498495 TMEM209Q96SK2 561 aa13.76□□□□□ -0.21
HSPG2-213ENST00000498495 C1QTNF1Q9BXJ1 281 aa13.76□□□□□ -0.21
HSPG2-213ENST00000498495 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.76□□□□□ -0.21
HSPG2-213ENST00000498495 DNMT3BQ9UBC3 853 aaKnown RBP13.76□□□□□ -0.21
HSPG2-213ENST00000498495 INSL5Q9Y5Q6 135 aa13.76□□□□□ -0.21
HSPG2-213ENST00000498495 SCN1AP35498 2009 aa13.76□□□□□ -0.21
HSPG2-213ENST00000498495 VCANP13611 3396 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 LRRIQ3A6PVS8 624 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-213ENST00000498495 CETN3O15182 167 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 MAPK13O15264 365 aa13.75□□□□□ -0.21
HSPG2-213ENST00000498495 C4BPAP04003 597 aaKnown RBP13.75□□□□□ -0.21
HSPG2-213ENST00000498495 KRT13P13646 458 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms