RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 HIP1RO75146 1068 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 RPP40O75818 363 aaKnown RBP15.19■□□□□ 0.02
CCDC58-207ENST00000498466 OAZ2O95190 189 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 VNN2O95498 520 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 ZNF806P0C7X5 589 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 PXNP49023 591 aaPredicted RBP15.19■□□□□ 0.02
CCDC58-207ENST00000498466 SHC2P98077 582 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 ORC2Q13416 577 aaPredicted RBP15.19■□□□□ 0.02
CCDC58-207ENST00000498466 SLC10A6Q3KNW5 377 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 GPR158Q5T848 1215 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 STPG1Q5TH74 334 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 GAB3Q8WWW8 586 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 LOXL4Q96JB6 756 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 ZBTB45Q96K62 511 aaPredicted RBP15.19■□□□□ 0.02
CCDC58-207ENST00000498466 DRC1Q96MC2 740 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 LRWD1Q9UFC0 647 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 SLC27A5Q9Y2P5 690 aa15.19■□□□□ 0.02
CCDC58-207ENST00000498466 RBM19Q9Y4C8 960 aaKnown RBP15.19■□□□□ 0.02
CCDC58-207ENST00000498466 OR6C75A6NL08 312 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 M0QZQ0 153 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 TM4SF5O14894 197 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 SLC16A4O15374 487 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 EPN2O95208 641 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 FGF19O95750 216 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 CCDC192P0DO97 292 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 GABRR2P28476 465 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.02
CCDC58-207ENST00000498466 SPAG1Q07617 926 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 TNK2Q07912 1038 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 STRN3Q13033 797 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 GPR17Q13304 367 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 NOLC1Q14978 699 aaKnown RBP eCLIP15.18■□□□□ 0.02
CCDC58-207ENST00000498466 ARHGAP15Q53QZ3 475 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 DSTYKQ6XUX3 929 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 GAREM2Q75VX8 874 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 DNAJB7Q7Z6W7 309 aaPredicted RBP15.18■□□□□ 0.02
CCDC58-207ENST00000498466 KBTBD6Q86V97 674 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 DAW1Q8N136 415 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 TMEM130Q8N3G9 435 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 BPIFB1Q8TDL5 484 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 SNX29Q8TEQ0 813 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 MKNK1Q9BUB5 465 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 OBP2AQ9NY56 170 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 DNM3Q9UQ16 869 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 ASB3Q9Y575 518 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 ASPMQ8IZT6 3477 aa15.18■□□□□ 0.02
CCDC58-207ENST00000498466 E9PMD0 336 aa15.17■□□□□ 0.02
CCDC58-207ENST00000498466 TOM1L1O75674 476 aa15.17■□□□□ 0.02
CCDC58-207ENST00000498466 CXCL8P10145 99 aa15.17■□□□□ 0.02
CCDC58-207ENST00000498466 MATR3P43243 847 aaKnown RBP eCLIP15.17■□□□□ 0.02
CCDC58-207ENST00000498466 RAP1GAPP47736 663 aa15.17■□□□□ 0.02
CCDC58-207ENST00000498466 PLCB2Q00722 1185 aa15.17■□□□□ 0.02
CCDC58-207ENST00000498466 TTC38Q5R3I4 469 aa15.17■□□□□ 0.02
CCDC58-207ENST00000498466 CENPPQ6IPU0 288 aa15.17■□□□□ 0.02
CCDC58-207ENST00000498466 ATAD1Q8NBU5 361 aa15.17■□□□□ 0.02
CCDC58-207ENST00000498466 PSMG2Q969U7 264 aa15.17■□□□□ 0.02
CCDC58-207ENST00000498466 KIF12Q96FN5 646 aa15.17■□□□□ 0.02
CCDC58-207ENST00000498466 SMOC1Q9H4F8 434 aa15.17■□□□□ 0.02
CCDC58-207ENST00000498466 THG1LQ9NWX6 298 aaKnown RBP15.17■□□□□ 0.02
CCDC58-207ENST00000498466 SLC8A2Q9UPR5 921 aa15.17■□□□□ 0.02
CCDC58-207ENST00000498466 PDCD11Q14690 1871 aaKnown RBP15.16■□□□□ 0.02
CCDC58-207ENST00000498466 CCDC163A0A0D9SF12 145 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 MTMR11A4FU01 709 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 SFI1A8K8P3 1242 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 SOAT2O75908 522 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 PRAMEF12O95522 483 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 LRPAP1P30533 357 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 ANAPC15P60006 121 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 PTPAQ15257 358 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 ITPRIPL2Q3MIP1 535 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 OVOS1Q6IE37 1185 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 PKN3Q6P5Z2 889 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 ITIH5Q86UX2 942 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 TTC9BQ8N6N2 239 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 TMEM209Q96SK2 561 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 RUSC1Q9BVN2 902 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 C17orf75Q9HAS0 396 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 PCDHGA5Q9Y5G8 931 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 STK24Q9Y6E0 443 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 RALGAPA1Q6GYQ0 2036 aa15.16■□□□□ 0.02
CCDC58-207ENST00000498466 CLDN3O15551 220 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 ATG13O75143 517 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 KCNK5O95279 499 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 MPLP40238 635 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 AARSP49588 968 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCDC58-207ENST00000498466 MCM2P49736 904 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 CYP4F8P98187 520 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 GRSF1Q12849 480 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCDC58-207ENST00000498466 MAPK7Q13164 816 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 GNL2Q13823 731 aaKnown RBP15.15■□□□□ 0.02
CCDC58-207ENST00000498466 MYBPC2Q14324 1141 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 PLA2G2CQ5R387 149 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 PSAPL1Q6NUJ1 521 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 RINT1Q6NUQ1 792 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 ARMCX5Q6P1M9 558 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 C8orf76Q96K31 380 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 GCNAQ96QF7 691 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 LSM14BQ9BX40 385 aaKnown RBP15.15■□□□□ 0.02
CCDC58-207ENST00000498466 RAB34Q9BZG1 259 aa15.15■□□□□ 0.02
CCDC58-207ENST00000498466 SMG9Q9H0W8 520 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms